| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is bisC [H]
Identifier: 218691842
GI number: 218691842
Start: 4156681
End: 4158960
Strand: Reverse
Name: bisC [H]
Synonym: ECED1_4236
Alternate gene names: 218691842
Gene position: 4158960-4156681 (Counterclockwise)
Preceding gene: 218691845
Following gene: 218691839
Centisome position: 79.83
GC content: 54.52
Gene sequence:
>2280_bases ATGCAGGTTGAAACCGACGGCGAAACCGTGTTTAGCTCGCGTGGCGCGTTAGCCACAGGAATGGAAAACTCCTTGCAGAG CGCGGTTCGCGACCAGGTTCACAGCAATACGCGGGTGCGATTTCCAATGGTGCGCAAAGGCTTTCTTGCGTCACCGGAAA ATCCGCAAGGCATTCGTGGGCAGGATGAATTTGTTCGCGTGAGTTGGGATGAGGCGCTGGAGCTTATTCACCATCAACAT AAACGCATTCGTGAGGCTTATGGCCCGGCATCGATTTTTGCTGGTTCCTACGGCTGGCGTTCAAACGGCGTGCTGCATAA GGCCTCGACATTATTACAACGCTATATGGCGCTGGCAGGCGGTTATACTGGGCATCTGGGGGATTATTCGACCGGCGCGG CACAGGCGATCATGCCGTATGTCGTGGGTGGCAGCGAAGTTTATCAACAGCAAACCAGTTGGCCGTTGGTATTGGAACAT AGCGATGTCGTGGTGCTATGGAGTGCTAATCCACTCAATACGCTGAAAATTGCGTGGAATGCATCCGATGAGCAGGGGCT TTCTTACTTTTCCGCACTGCGTGACAGCGGGAAAAAGCTGATCTGCATTGATCCAATGCGATCGGAAACCGTCGATTTCT TTGGCGATAAAATGGAGTGGGTGGCACCGCACATGGGCACCGATGTTGCGCTGATGCTGGGGATCGCCCATACGCTGGTG GAAAATGGTTGGCACGACGAAGCGTTTCTGGCGCGTTGCACCACCGGTTATGCCGTCTTCGCCTCTTATTTGCTGGGCGA GAGTGACGGAATAGCGAAAACCGCCGAATGGGCGGCAGGGATTTGTGGGGTTAACGCAGCGAAAATCCGCGAGCTGGCGG CTCTTTTCCACCAAAATACCACCATGCTGATGGCTGGCTGGGGAATGCAGCGTCAACAGTTTGGTGAGCAAAAACATTGG ATGATCGTCACGCTGGCGGCAATGTTGGGGCAAATCGGCACACCCGGCGGCGGTTTTGGTCTTTCTTACCATTTTGCCAA TGGTGGTAACCCCACGCGCCGCGCTGCGGTGCTCTCTTCCATGCAGGGCAGTTTGCCTGGCGGCACCGATGCGGTGGATA AAATCCCTGTTGCCCGCATTGTTGAAGCACTGGAAAACCCCGGTGGCGCATATCAACATAACGGTATGGACCGACATTTC CCGGATATTCGTTTTATCTGGTGGGCGGGCGGTGCCAACTTTACTCATCATCAGGATACCAATCGCCTGATCCGTGCCTG GCAAAAACCGGAGCTGGTGGTGATCTCCGAATGCTTCTGGACGGCTGCGGCGAAACACGCGGATATCGTTCTGCCTGCGA CCACCTCTTTTGAGCGTAATGATCTCACCATGACCGGTGATTACAGTAATCAGCATCTGGTGCCGATGAAGCAAGTGGTG CCGCCACGCGATGAAGCGCGTAATGATTTTGATGTTTTTGCCGACTTGAGTGAACGTTGGCAGAAGGGCGGTTATGCACG TTTTACGGAAGGAAAAAGTGAGCTGCAATGGCTGGAAACGTTTTATAACGTTGCCCGGCAGCGCGGGGCAAGCCAGCAGG TTGAATTGCCGCCATTTGCTGAGTTCTGGCAAGCCAACCAGTTAATTGAGATGCCGGAAAACCCGGACAGTGAGCGGTTT ATTCGCTTCGCCGATTTTCGCCGCGATCCGCAGGCGCATCCATTAAAAACCGCCAGCGGTAAGATTGAAATCTTCTCGCA GCGTATTGCCGATTACGCTTATCCGGATTGCCCGGGGCATCCAATGTGGCTGGCGCCGGACGAATGGCAGGGCAATGCCG AACCGGAACAGTTGCAGGTACTTTCTGCTCATCCGGCGCATCGTCTGCACAGCCAGCTGAATTACAGTTCTCTGCGCGAA TTGTACGCGGTGGCAAATCGTGAGCCTGTCACCATTCATCCTGACGATGCCCAGACGCGCGGCATACAAGATGGCGATAC TGTTCGGCTGTGGAACTCACGCGGGCAAATTCTTGCCGGAGCGGTCATTAGCGAGGGAATTAAACCTGGCGTGATTTGTA TTCACGAAGGCGCATGGCCAGATCTGGATTTAACCGCTGACGGCATTTGTAAAAACGGCGCAGTGAACGTGCTGACCAAA GATCTCCCCAGCTCGCGGCTGGGGAATGGCTGTGCGGGTAATACGGCGCTGGCATGGCTGGAAAAATACAACGGTCCGGA ACTGACACTTACAGCGTTTGAACCACCGGCCAGCTCATAA
Upstream 100 bases:
>100_bases TAATATTTAACTGCTCAATACATCTAACCTTTCAGGAGTCTTCGGTTTGGCCAACTCATCCTCACGATATTCCGTTCTGA CTGCCGCCCACTGGGGGCCC
Downstream 100 bases:
>100_bases TCCAGGTGGGTAGTTGGGTTTCATCCTGCCATGCGCAATCGACAATGTGAAAACCCTGCGCATGGTAGAAATCTATCGCC GGTTGATTTTTTTGATAAAC
Product: biotin sulfoxide reductase
Products: Biotin. [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MQVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALELIHHQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAGICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRDEARNDFDVFADLSERWQKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERF IRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLAPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPVTIHPDDAQTRGIQDGDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS
Sequences:
>Translated_759_residues MQVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALELIHHQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAGICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRDEARNDFDVFADLSERWQKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERF IRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLAPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPVTIHPDDAQTRGIQDGDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS >Mature_759_residues MQVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALELIHHQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAGICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRDEARNDFDVFADLSERWQKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERF IRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLAPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPVTIHPDDAQTRGIQDGDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI145693196, Length=759, Percent_Identity=97.6284584980237, Blast_Score=1543, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=763, Percent_Identity=64.089121887287, Blast_Score=1050, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=747, Percent_Identity=44.0428380187416, Blast_Score=585, Evalue=1e-168, Organism=Escherichia coli, GI87081797, Length=752, Percent_Identity=32.4468085106383, Blast_Score=306, Evalue=3e-84, Organism=Escherichia coli, GI1787870, Length=753, Percent_Identity=30.5444887118194, Blast_Score=290, Evalue=3e-79, Organism=Escherichia coli, GI171474008, Length=753, Percent_Identity=30.4116865869854, Blast_Score=277, Evalue=2e-75, Organism=Escherichia coli, GI3868721, Length=474, Percent_Identity=23.6286919831224, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 83889; Mature: 83889
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRG CCCCCCCCHHHHCCCCCHHCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCC QDEFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAG CCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHC GYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWN CCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCCEEEEECCCCCCEEEEEEC ASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHH ENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAGICGVNAAKIRELAALFHQNT HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC TMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSS EEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH MQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHFPDIRFIWWAGGANFTHHQDT HCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH NRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV HHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHCC PPRDEARNDFDVFADLSERWQKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFA CCHHHCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EFWQANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGH HHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PMWLAPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQTR CEECCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCHHHC GIQDGDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK CCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS CCCCHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MQVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRG CCCCCCCCHHHHCCCCCHHCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCC QDEFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAG CCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHC GYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWN CCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCCEEEEECCCCCCEEEEEEC ASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHH ENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAGICGVNAAKIRELAALFHQNT HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC TMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSS EEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH MQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHFPDIRFIWWAGGANFTHHQDT HCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH NRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV HHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHCC PPRDEARNDFDVFADLSERWQKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFA CCHHHCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EFWQANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGH HHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PMWLAPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQTR CEECCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCHHHC GIQDGDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK CCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS CCCCHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]