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The map label for this gene is gspF [H]

Identifier: 218691612

GI number: 218691612

Start: 3901204

End: 3902400

Strand: Direct

Name: gspF [H]

Synonym: ECED1_3992

Alternate gene names: 218691612

Gene position: 3901204-3902400 (Clockwise)

Preceding gene: 218691611

Following gene: 218691613

Centisome position: 74.89

GC content: 50.54

Gene sequence:

>1197_bases
ATGAATTATCGCTATCGCGCCATGACCCAGGATGGTCAAAAATTGCAGGGGATCATTGATGCTAACGATGAACGTCAGGC
ACGACTGCGGCTGCGTGAAGAAGGGCTTTTCCTGTTGGATATTCGCCCCCAAAAAAGTTCGGGAGTAAAAACACGTCGCC
CGAGGATCAGCCATAGTGAACTAACGCTTTTCACCCGGCAGTTGGCAACCTTAAGCGCAGCGGCATTACCCCTGGAAGAG
AGCCTTGCTGTAATTGGTCAACAAAGCAGTAATAATCGACTGGCTGACGTGTTAAATCAGGTACGCAGCGCCATCCTTGA
AGGGCATCCCCTTTCCGATGCGTTACAACATTTTCCCACGCTTTTCGATTCGCTCTACCGTACCCTGGTAAAAGCGGGCG
AAAAGAGCGGTCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTC
ATTCAGTCACTGATCTACCCCTGCATGCTCACTACGGTGGCGATTGTGGTCGTGATTATTCTCCTCACTGCTGTCGTGCC
CAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCACTGAGTACACGCATTCTTTTAGGTCTGAGCGACACGT
TGCAACGTACCGGCCCGACATTATTAGCGACAGTATTTATTGTCGCTGTGGGTTTCTGGCTCTGGTTAAAACGCGGCAAT
AACCGCCACCGTTTTCATGCCATGTTACTGCGCGTTGCGCTCATCGGCCCGCTGATTTGCGCCATTAACAGCGCACGCTA
TCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCTGCTGGATGGGATGAATTTGTCCACCGAAAGCCTCAACA
ACCTCGAAATTCGCCAGCGCCTGGCAAATGCGGCAGAAAACGTTCGCCAGGGTAACAGCATTCATCTTTCACTGGAACAA
ACCGCAATTTTCCCGCCGATGATGCTCTACATGGTGGCCTCTGGCGAAAAAAGCGGGCAACTCGGCACGTTAATGGTCAG
AGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTA
CGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAA

Upstream 100 bases:

>100_bases
ACAATGCCTTAATCAAAAATGGCCTGCAAAAAGTGATACGCGGTGACACCTCCTGGGATGAGGTTATGCGCGTCGCCAGT
GCCACGCTGGAGAACGAAGC

Downstream 100 bases:

>100_bases
GGAAATCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTAATTGTCATCATTGGCGT
ACTCGCCAGCCTGGTGGTTC

Product: general secretory pathway component, cryptic

Products: NA

Alternate protein names: Protein transport protein hofF [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSELTLFTRQLATLSAAALPLEE
SLAVIGQQSSNNRLADVLNQVRSAILEGHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKL
IQSLIYPCMLTTVAIVVVIILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGN
NRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQRLANAAENVRQGNSIHLSLEQ
TAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRIALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN

Sequences:

>Translated_398_residues
MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSELTLFTRQLATLSAAALPLEE
SLAVIGQQSSNNRLADVLNQVRSAILEGHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKL
IQSLIYPCMLTTVAIVVVIILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGN
NRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQRLANAAENVRQGNSIHLSLEQ
TAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRIALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN
>Mature_398_residues
MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSELTLFTRQLATLSAAALPLEE
SLAVIGQQSSNNRLADVLNQVRSAILEGHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKL
IQSLIYPCMLTTVAIVVVIILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGN
NRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQRLANAAENVRQGNSIHLSLEQ
TAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRIALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=398, Percent_Identity=99.2462311557789, Blast_Score=795, Evalue=0.0,
Organism=Escherichia coli, GI1786295, Length=339, Percent_Identity=24.7787610619469, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44382; Mature: 44382

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSE
CCCEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHH
LTLFTRQLATLSAAALPLEESLAVIGQQSSNNRLADVLNQVRSAILEGHPLSDALQHFPT
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIVVVII
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
NRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQR
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH
LANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRI
HHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHCCE
ALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSE
CCCEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHH
LTLFTRQLATLSAAALPLEESLAVIGQQSSNNRLADVLNQVRSAILEGHPLSDALQHFPT
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIVVVII
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
NRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQR
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH
LANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRI
HHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHCCE
ALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7896718 [H]