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The map label for this gene is yrdA [H]

Identifier: 218691566

GI number: 218691566

Start: 3870288

End: 3871169

Strand: Direct

Name: yrdA [H]

Synonym: ECED1_3943

Alternate gene names: 218691566

Gene position: 3870288-3871169 (Clockwise)

Preceding gene: 218691565

Following gene: 218691573

Centisome position: 74.29

GC content: 46.15

Gene sequence:

>882_bases
TTGCGACGCGGCTTTCAGCTCACTGTCGCGAGGTGGCGTATATTACGCTTTCCTCTTTCAGAGTCAACCCTGAACTTCAG
GATTTTTTCTCTTTGTTGTTACGACCATCTTGTGAAGTGTTTCACGTTGTCGTCTCAACGGAGGCGCATTATAGGGATCC
CAATTTTTTGCACAAGTACTTTTTTGATCTTTTTTTCTGTTTGTTGCTTTTTCACCCTTTTTGCTGCATTCGCACACAAA
ACGGTGCTTTTTTGCATGCTAAAAGACTTGCACAAGGCCAATAATGCACCCAAAGTCATTAGTAAATCATTTATTGTTGA
GGTGAGTATGTCTGATGTTTTACGCCCATACCGCGATCTTTTTCCACAAATCGGTCAGCGCGTAATGATCGACGATAGCA
GCGTCGTGATTGGTGACGTTCGTCTGGCTGATGATGTGGGGATCTGGCCGCTCGTTGTGATTCGTGGAGATGTACATTAT
GTACAGATCGGAGCACGCACCAATATCCAGGATGGCAGTATGTTGCATGTCACTCATAAATCCTCGTACAACCCAGATGG
CAACCCATTAACCATTGGCGAAGATGTCACTGTTGGTCACAAGGTGATGCTCCACGGCTGCACCATTGGCAATCGAGTTT
TGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGCCTGGTCCCA
CAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAA
GGCTGGGTTACGCTATTCCGCAAATAACTACGTGAAATGGAAGGACGAATATCTGGATCAAGGTAACCAGACCCAACCTT
GA

Upstream 100 bases:

>100_bases
TTCACTCCTGAGACTTGGTATTCATTTTTCGTCTTGCGACGTCAAGAATCCGTATCTTCGAGTGCCCACACAGATTGTCT
GATAAATTGTTAAAGAGCAG

Downstream 100 bases:

>100_bases
TCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCA
CTGTTCTGGCGTATCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRRGFQLTVARWRILRFPLSESTLNFRIFSLCCYDHLVKCFTLSSQRRRIIGIPIFCTSTFLIFFSVCCFFTLFAAFAHK
TVLFCMLKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHY
VQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVP
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP

Sequences:

>Translated_293_residues
MRRGFQLTVARWRILRFPLSESTLNFRIFSLCCYDHLVKCFTLSSQRRRIIGIPIFCTSTFLIFFSVCCFFTLFAAFAHK
TVLFCMLKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHY
VQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVP
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP
>Mature_293_residues
MRRGFQLTVARWRILRFPLSESTLNFRIFSLCCYDHLVKCFTLSSQRRRIIGIPIFCTSTFLIFFSVCCFFTLFAAFAHK
TVLFCMLKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHY
VQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVP
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=100, Blast_Score=379, Evalue=1e-107,
Organism=Escherichia coli, GI1787667, Length=158, Percent_Identity=32.2784810126582, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081681, Length=177, Percent_Identity=32.2033898305085, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32941; Mature: 32941

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGFQLTVARWRILRFPLSESTLNFRIFSLCCYDHLVKCFTLSSQRRRIIGIPIFCTST
CCCCEEEEHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHH
FLIFFSVCCFFTLFAAFAHKTVLFCMLKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECHHHHHHHHHHH
FPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK
HHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEC
SSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVP
CCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCHHHHCCEEEECCEEEECCCCCC
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP
CCCCCCCCEEEECCCHHHHCCCCCCHHCCCEECCCCEEEECHHHHCCCCCCCC
>Mature Secondary Structure
MRRGFQLTVARWRILRFPLSESTLNFRIFSLCCYDHLVKCFTLSSQRRRIIGIPIFCTST
CCCCEEEEHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHH
FLIFFSVCCFFTLFAAFAHKTVLFCMLKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECHHHHHHHHHHH
FPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK
HHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEC
SSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVP
CCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCHHHHCCEEEECCEEEECCCCCC
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP
CCCCCCCCEEEECCCHHHHCCCCCCHHCCCEECCCCEEEECHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]