| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691540
Identifier: 218691540
GI number: 218691540
Start: 3839612
End: 3840658
Strand: Reverse
Name: 218691540
Synonym: ECED1_3908
Alternate gene names: NA
Gene position: 3840658-3839612 (Counterclockwise)
Preceding gene: 218691541
Following gene: 218691535
Centisome position: 73.72
GC content: 50.24
Gene sequence:
>1047_bases ATGAAAAGCGAAATTTGGTCGTGGATTGGCGATCTCTCGCAGGTTGCCGGAATTAAACACTATGAGTTACGTAGTGGCAG AGCAAAGGGTACAGAAGCGTTTGATGTCCGTACTGGTGCGGGACTGGCATTTACGGTGGTAAAAGATCGCGCGCTGGATA TTGCATGGGCCAGCTACAAGGACACTGCGCTCTCTTTTATCACCCCCAACGGTGTTGTCGCCCCCGCTTTTTTTGAGTCT CAGGGCAACGGGTTTTTACGTAGCTTTTACGCGGGGTTACTGACTACCTGCGGACTTAGCTACATTGGCACGCCCTGTGA GGATGAAGGAGAAACGCTGGGGTTACACGGGCGTTTGGCTGCGACTCCAGCAGAAGAGGTGGGGTATCGCACAGAACGGA CCGACGACAGCATTGAATTTGTCATCAATGGCAAAGTACGGGAAACACGATTGTTCGGTGAAAATCTGACGCTGGAAAGG ACCATTCGCTGCCGTTATGGCGAAAATGTGCTGCGCATTGAAGACAAGGTGACTAATCATGGTTTCACCCGCCAGCCGCT GCAAATTCTTTATCACTTTAATTACGGCTGGCCTTTATTATCGCCACAGGCAGAAATTTTGCTGTCGGCTAAAAGCGTAA CGCCACGAACCCCGCATGCGGCGGAAGGGTTAGCCAGTCATCTGGAGATTTGTACCCCACAGCCCGGTTTTGACGAGCAG GTTTACTATCTCACGTTGAATAGCGACAGTCAGGGGATGAGTAAAGTTGCGCTGGTGAACGCCGAACTGGGGTGGGGAAT TTACGAGAAATTCGACATCATGCAGCTACCCAACTTTATCCAGTGGAAAAATTTAGGCGCGGGTGAATATGTTATGGGAC TGGAGGTCAGTAATAGTTTTCTTGACGGTCGTGATAAAGAACGAGCGCAGGGGCGTCTGCCCTTTATTGAACCAGGGGAA ACAAAGAAATACTGCTTTGAGCTGGGAATTGTTGATGGCGATGCTGAAATTAGCGCGTTGAAAGCGGAAATTGCAGGCTA CCGTTAG
Upstream 100 bases:
>100_bases TGGCGGTAACCCGACGTGGCCCAATGGAGGGAACGTCTCGCCTTATGGAAATCGAAACGTTCATCCAGCGCCATGACATG TCCATTCGGGAAGCAGCACA
Downstream 100 bases:
>100_bases TTAACGGCAATAAAAACGCCGGGTAGCATTAACAGGCCCGGCGTTGATTACGTTCTTTGCTAAGCGCGATGGAAACACCG CGCGTCACAAATTATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKSEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAFTVVKDRALDIAWASYKDTALSFITPNGVVAPAFFES QGNGFLRSFYAGLLTTCGLSYIGTPCEDEGETLGLHGRLAATPAEEVGYRTERTDDSIEFVINGKVRETRLFGENLTLER TIRCRYGENVLRIEDKVTNHGFTRQPLQILYHFNYGWPLLSPQAEILLSAKSVTPRTPHAAEGLASHLEICTPQPGFDEQ VYYLTLNSDSQGMSKVALVNAELGWGIYEKFDIMQLPNFIQWKNLGAGEYVMGLEVSNSFLDGRDKERAQGRLPFIEPGE TKKYCFELGIVDGDAEISALKAEIAGYR
Sequences:
>Translated_348_residues MKSEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAFTVVKDRALDIAWASYKDTALSFITPNGVVAPAFFES QGNGFLRSFYAGLLTTCGLSYIGTPCEDEGETLGLHGRLAATPAEEVGYRTERTDDSIEFVINGKVRETRLFGENLTLER TIRCRYGENVLRIEDKVTNHGFTRQPLQILYHFNYGWPLLSPQAEILLSAKSVTPRTPHAAEGLASHLEICTPQPGFDEQ VYYLTLNSDSQGMSKVALVNAELGWGIYEKFDIMQLPNFIQWKNLGAGEYVMGLEVSNSFLDGRDKERAQGRLPFIEPGE TKKYCFELGIVDGDAEISALKAEIAGYR >Mature_348_residues MKSEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAFTVVKDRALDIAWASYKDTALSFITPNGVVAPAFFES QGNGFLRSFYAGLLTTCGLSYIGTPCEDEGETLGLHGRLAATPAEEVGYRTERTDDSIEFVINGKVRETRLFGENLTLER TIRCRYGENVLRIEDKVTNHGFTRQPLQILYHFNYGWPLLSPQAEILLSAKSVTPRTPHAAEGLASHLEICTPQPGFDEQ VYYLTLNSDSQGMSKVALVNAELGWGIYEKFDIMQLPNFIQWKNLGAGEYVMGLEVSNSFLDGRDKERAQGRLPFIEPGE TKKYCFELGIVDGDAEISALKAEIAGYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38646; Mature: 38646
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAFTVVKDRALDIAWASYK CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCEEEEEEECCC DTALSFITPNGVVAPAFFESQGNGFLRSFYAGLLTTCGLSYIGTPCEDEGETLGLHGRLA CCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEECCEEE ATPAEEVGYRTERTDDSIEFVINGKVRETRLFGENLTLERTIRCRYGENVLRIEDKVTNH CCCHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCEEEEEEEEECCCCEEEEEEHHCCC GFTRQPLQILYHFNYGWPLLSPQAEILLSAKSVTPRTPHAAEGLASHLEICTPQPGFDEQ CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEECCCCCCCCCE VYYLTLNSDSQGMSKVALVNAELGWGIYEKFDIMQLPNFIQWKNLGAGEYVMGLEVSNSF EEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHCCCCCCCCEEEEEEECCCC LDGRDKERAQGRLPFIEPGETKKYCFELGIVDGDAEISALKAEIAGYR CCCCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCC >Mature Secondary Structure MKSEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAFTVVKDRALDIAWASYK CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCEEEEEEECCC DTALSFITPNGVVAPAFFESQGNGFLRSFYAGLLTTCGLSYIGTPCEDEGETLGLHGRLA CCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEECCEEE ATPAEEVGYRTERTDDSIEFVINGKVRETRLFGENLTLERTIRCRYGENVLRIEDKVTNH CCCHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCEEEEEEEEECCCCEEEEEEHHCCC GFTRQPLQILYHFNYGWPLLSPQAEILLSAKSVTPRTPHAAEGLASHLEICTPQPGFDEQ CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEECCCCCCCCCE VYYLTLNSDSQGMSKVALVNAELGWGIYEKFDIMQLPNFIQWKNLGAGEYVMGLEVSNSF EEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHCCCCCCCCEEEEEEECCCC LDGRDKERAQGRLPFIEPGETKKYCFELGIVDGDAEISALKAEIAGYR CCCCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA