| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yhbX [H]
Identifier: 218691464
GI number: 218691464
Start: 3762674
End: 3764299
Strand: Reverse
Name: yhbX [H]
Synonym: ECED1_3832
Alternate gene names: 218691464
Gene position: 3764299-3762674 (Counterclockwise)
Preceding gene: 218691465
Following gene: 218691462
Centisome position: 72.26
GC content: 42.99
Gene sequence:
>1626_bases ATGACAGTATTCAACAAATTTGTTAGAAGTTTTAAATCTCATTGGTTGTTGTATCTTTGTGTTATTGTTTTTGGTATTAC GAACTTAGTCGCCTCTTCCGGAGCGCATATGGTTCAGCGATTGCTGTTTTTCGTTCTGACCATCCTGGTTGTTAAACGTA TATCATCCCTTCCGCTTCGCCTGCTTGTTGCCACACCATTTGTGTTACTGACAGCGGCAGACATGAGTATTAGCCTCTAT TCATGGTGTACCTTTGGTACAGCTTTCAATGATGGATTTGCGATTAGTGTGCTGCAGAGTGATCCGGATGAAGTTGTCAA AATGCTGGGGATGTATATCCCTTATCTATGTGCTTTTGCCTTTTTATCCCTTCTTTTTTTGGCAGTAATAATAAAATATG ATGTTTCCTTGCCGACGAAAAAAGTGACAGGAATATTATTGCTGATTGTCATTTCGGGCAGTTTATTTTCCGCTTGTCAA TTTGCTTATAAAGATGCAAAAAATAAAAAAGCGTTCAGTCCATATATACTAGCGTCGCGATTTGCTACCTATACACCGTT TTTCAATCTCAATTATTTTGCTTTAGCAGCGAAAGAGCATCAAAGATTACTCTCAATTGCAAACACGGTGCCGTGTTTTC AATTATCAGTCAGGGATACAGGTATTGATACCTACGTGTTGATTGTGGGGGAGTCTGTACGTGTCGACAATATGTCTTTG TATGGATATACACGCTCTACGACACCGCAAGTCGAAGCACAAAGAAAACAGATCAAACTGTTTAATCAAGCAATAAGCGG TGCACCTTACACTGCGCTGTCGGTTCCCCTTTCTTTAACTGCTGATTCTGTTTTGAGTCATGACATTCATAATTACCCGG ACAACATTATTAATATGGCTAATCAAGCAGGATTTCAGACTTTCTGGCTAAGCTCGCAATCCGCTTTTCGGCAGAATGGT ACAGCAGTTACCAGTATCGCCATGCGCGCCATGGAAACAGTCTATGTCAGAGGATTTGATGAATTGTTGTTGCCTCATTT ATCGCAAGCGTTACAGCAAAAGACGCAGCAAAAGAAACTGATTGTTCTTCATTTAAATGGAAGCCATGAACCGGCTTGTA GCGCCTATCCGCAATCCAGCGCTGTGTTTCAACCGCAGGACGATCAGGATGCCTGCTATGACAACTCCATTCATTACACA GATAGTTTGCTAGGTCAGGTTTTTGAATTATTAAAAGATCGCCGCGCCTCGGTCATGTATTTTGCCGACCACGGCCTGGA ACGCGACCCTACGAAGAAGAACGTCTATTTTCATGGAGGCAGGGAGGCTAGCCAGCAGGCGTATCATGTCCCGATGTTTA TCTGGTATAGTCCCGTTCTAGGGGATGGCGTGGATCGCACAACGGAAAACAACATCTTTTCGACAGCTTACAATAATTAC CTTATTAATGCGTGGATGGGGGTAACAAAGCCGGAACAGCCGCAAACGCTTGAGGAAGTGATTGCACACTATAAAGGAGA CTCACGGGTTGTGGATGCAAACCATGATGTTTTCGATTATGTGATGCTCAGAAAGGAGTTTACAGAGGATAATCAAGGTA ACCCCACCCCTGAAGGGCAGGGTTGA
Upstream 100 bases:
>100_bases GTGTTTCGGTCTGATATGGATCAGAGTTGAAAAACATGTCTGATATAAAATTGAACATTGTTGATAATTGTTTATATTGG TTGTGAACTTGGATTTCTGG
Downstream 100 bases:
>100_bases TGTCGAATTACTGGCCTTTATTTTCCAGATTCTCCACCTGCGGCACCCCTGAAGCGGCAGAGGAGGAGAGCAGGCCAGTT TTGGCATAACCGAAAAGTTT
Product: putative hydrolase, inner membrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MTVFNKFVRSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVATPFVLLTAADMSISLY SWCTFGTAFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ FAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPCFQLSVRDTGIDTYVLIVGESVRVDNMSL YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNG TAVTSIAMRAMETVYVRGFDELLLPHLSQALQQKTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYT DSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNY LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDNQGNPTPEGQG
Sequences:
>Translated_541_residues MTVFNKFVRSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVATPFVLLTAADMSISLY SWCTFGTAFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ FAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPCFQLSVRDTGIDTYVLIVGESVRVDNMSL YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNG TAVTSIAMRAMETVYVRGFDELLLPHLSQALQQKTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYT DSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNY LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDNQGNPTPEGQG >Mature_540_residues TVFNKFVRSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVATPFVLLTAADMSISLYS WCTFGTAFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQF AYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPCFQLSVRDTGIDTYVLIVGESVRVDNMSLY GYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGT AVTSIAMRAMETVYVRGFDELLLPHLSQALQQKTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTD SLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYL INAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDNQGNPTPEGQG
Specific function: Involved In Adherence (By Similarity). [C]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family [H]
Homologues:
Organism=Escherichia coli, GI87082223, Length=541, Percent_Identity=98.7060998151571, Blast_Score=1110, Evalue=0.0, Organism=Escherichia coli, GI1787035, Length=268, Percent_Identity=30.2238805970149, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790392, Length=479, Percent_Identity=24.2171189979123, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI87082286, Length=257, Percent_Identity=31.5175097276265, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87082372, Length=293, Percent_Identity=26.962457337884, Blast_Score=83, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 60707; Mature: 60576
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFNKFVRSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH LLVATPFVLLTAADMSISLYSWCTFGTAFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFA HHHHCCHHHEEECCCCEEHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH FLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHH FATYTPFFNLNYFALAAKEHQRLLSIANTVPCFQLSVRDTGIDTYVLIVGESVRVDNMSL HHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCEEEECCEEE YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMA EEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHH NQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQKTQQKKL HHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCE IVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMY EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE FADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNY EECCCCCCCCCCCCEEEECCCCCCCCCEECEEEEEECCHHCCCCCCCCCCCEEHHHHCCE LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDNQGNPTPEGQ EEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC G C >Mature Secondary Structure TVFNKFVRSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH LLVATPFVLLTAADMSISLYSWCTFGTAFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFA HHHHCCHHHEEECCCCEEHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH FLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHH FATYTPFFNLNYFALAAKEHQRLLSIANTVPCFQLSVRDTGIDTYVLIVGESVRVDNMSL HHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCEEEECCEEE YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMA EEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHH NQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQKTQQKKL HHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCE IVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMY EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE FADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNY EECCCCCCCCCCCCEEEECCCCCCCCCEECEEEEEECCHHCCCCCCCCCCCEEHHHHCCE LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDNQGNPTPEGQ EEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]