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The map label for this gene is 218691225

Identifier: 218691225

GI number: 218691225

Start: 3501423

End: 3502085

Strand: Reverse

Name: 218691225

Synonym: ECED1_3578

Alternate gene names: NA

Gene position: 3502085-3501423 (Counterclockwise)

Preceding gene: 218691226

Following gene: 218691224

Centisome position: 67.22

GC content: 59.73

Gene sequence:

>663_bases
ATGGCGCGTGGCAGCCTTCTGACAATGGCGCTGTTGAGCATGGCTGTCAGCAGTTTCTGCCGGGCGGGGGAGCATGATAT
CCCTGAGGGGTATGTGCGCGTGGCTGCCGTGCATGGTGTGCCTGCAGAAGTGCTCTATGCCGTCTCTCTGACAGAGACGG
TGATGGCGCCCTCTGCGATTGCCGGTGTGATGAAAAAACGGGATGCGGATTTCCGCCTCCCGTCCGTTGCACGTCCCTGG
CCGTGGACCATCAATGTGGCTGGTAAGGGCTACCGCTATGCCAGTCGCCTGGAAGCCTGGCAGGCACTTCAGGTTTTTCT
GACACGGTATCCGGCCCGGCGGATTGACGTGGGAATTGCTCAGGTCAATCTGGGCTGGAACGGGCACCGTTTCTCCTCCA
CATGGGCGGCATTTGATCCGTACATCAGTCTGAACACCGCGGCGACCATCCTGAGTGAATGCCGTCGTCGTCATCCTGTC
AGCTGGCTGCAGGCGGCCGGTTGTTATCATCATCCGGCAGGTGGTGCTCCGGCAGTACGCTACACCGCAGTGGTCAGACA
ACATATTGAGCGTCTTCATCGTGATGCGGTGAAGACCGCAGAGCAGCATGACGGCCTGACCGCCATGCATCCCCGTTATA
TCTGGACAGAACCCCGGGAGTGA

Upstream 100 bases:

>100_bases
GGGTGCGAAGCCGCCATATTACCCTGAATCATGATGCCGGTCGCTGGCTGCGTTTTGGTGAAGGCAGAATGCCGGTTGTA
CTGCAGCAGGGAGCGGACGG

Downstream 100 bases:

>100_bases
TACCTGTGAAACGATATGTAATGACGGCAGTGTGGCCCCTGCTGCTGTGCGCGTCTCAGGCTGGCGCGGAACTCAGGGTT
ATTGCGGACCTTGGAGGCAG

Product: putative Lytic transglycosylase, catalytic

Products: NA

Alternate protein names: Transglycosylase Slt Family; Lytic Transglycosylase; Signal Peptide; Transglycosylase SLT Domain-Containing Protein; Type IV Secretory Pathway Lytic Transglycosylase; Soluble Lytic Murein Transglycosylase; Transglycosylase SLT Domain-Containing

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MARGSLLTMALLSMAVSSFCRAGEHDIPEGYVRVAAVHGVPAEVLYAVSLTETVMAPSAIAGVMKKRDADFRLPSVARPW
PWTINVAGKGYRYASRLEAWQALQVFLTRYPARRIDVGIAQVNLGWNGHRFSSTWAAFDPYISLNTAATILSECRRRHPV
SWLQAAGCYHHPAGGAPAVRYTAVVRQHIERLHRDAVKTAEQHDGLTAMHPRYIWTEPRE

Sequences:

>Translated_220_residues
MARGSLLTMALLSMAVSSFCRAGEHDIPEGYVRVAAVHGVPAEVLYAVSLTETVMAPSAIAGVMKKRDADFRLPSVARPW
PWTINVAGKGYRYASRLEAWQALQVFLTRYPARRIDVGIAQVNLGWNGHRFSSTWAAFDPYISLNTAATILSECRRRHPV
SWLQAAGCYHHPAGGAPAVRYTAVVRQHIERLHRDAVKTAEQHDGLTAMHPRYIWTEPRE
>Mature_219_residues
ARGSLLTMALLSMAVSSFCRAGEHDIPEGYVRVAAVHGVPAEVLYAVSLTETVMAPSAIAGVMKKRDADFRLPSVARPWP
WTINVAGKGYRYASRLEAWQALQVFLTRYPARRIDVGIAQVNLGWNGHRFSSTWAAFDPYISLNTAATILSECRRRHPVS
WLQAAGCYHHPAGGAPAVRYTAVVRQHIERLHRDAVKTAEQHDGLTAMHPRYIWTEPRE

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24502; Mature: 24371

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGSLLTMALLSMAVSSFCRAGEHDIPEGYVRVAAVHGVPAEVLYAVSLTETVMAPSAI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHH
AGVMKKRDADFRLPSVARPWPWTINVAGKGYRYASRLEAWQALQVFLTRYPARRIDVGIA
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEE
QVNLGWNGHRFSSTWAAFDPYISLNTAATILSECRRRHPVSWLQAAGCYHHPAGGAPAVR
EEEECCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHH
YTAVVRQHIERLHRDAVKTAEQHDGLTAMHPRYIWTEPRE
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEECCCCCC
>Mature Secondary Structure 
ARGSLLTMALLSMAVSSFCRAGEHDIPEGYVRVAAVHGVPAEVLYAVSLTETVMAPSAI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHH
AGVMKKRDADFRLPSVARPWPWTINVAGKGYRYASRLEAWQALQVFLTRYPARRIDVGIA
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEE
QVNLGWNGHRFSSTWAAFDPYISLNTAATILSECRRRHPVSWLQAAGCYHHPAGGAPAVR
EEEECCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHH
YTAVVRQHIERLHRDAVKTAEQHDGLTAMHPRYIWTEPRE
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA