| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691194
Identifier: 218691194
GI number: 218691194
Start: 3470843
End: 3471847
Strand: Reverse
Name: 218691194
Synonym: ECED1_3546
Alternate gene names: NA
Gene position: 3471847-3470843 (Counterclockwise)
Preceding gene: 218691195
Following gene: 218691192
Centisome position: 66.64
GC content: 38.61
Gene sequence:
>1005_bases ATGATCCGGAGGCTGCAGATGTTGCTGGGTAATCTTTTTTATATCAGAAATGGTATATCCATGTCAGGGATGAAAGTCTG TCATTGTTCATTTCCTGATTCAGTGCCCGTTCTTCGTCCCGCGAGCACACAGGAAAGAACGATTGCCGGATGGATTAACC GTGCTTCTGTTGATGAATGTAATATTTATCCTGCAGGGGCACTATTTGTTTCAACTAATGGGGAAGGAAGTCACAGCTAC TCCTACGTTTCTTCATTTGAGTTTGTATGTAATACTGATATTTCTGTTCTTATTCCTAAAAAGGATATGGGATTGTTTGA AAAAATATATTACTCTCGTTGTATAACTATGAACAGATATTTATTTTCTTATGGTCGCAAACCCAAAGGGAAAAGACTAA AACACATTGAGCTTCCTGACATAATACCGGACTGGGTAATGAATTTATCTGCCAGTATGAATGAGGTCAGAGACGGTTTT GAACTCCTGATGTCGGGTAATGTGCAGGGATTTAATATCTGTTGTCGTCATGGTAATAATTATCCTGAACAGAAACTGAT ACCTTTATCAGAGTTATTTGATGTTAATTATGGACTGAATCTTGAGCTCAATAAACTGGAGAAAGATTCTTCAGGAATCA ATTTTGTTTCAAGAACGTCAAAAAATAATGGTGTTTCCGCCAGGGTTAAATTAATAGATGGTATTAGCCCATTGCCAGCC GGTGTGTTAACTGTGGCAGCAGGAGGTTCAGTTATGGAAACGTTTGTACAGGATTCACCATTTTATAGTGGAAGAGATCT TTATTGGTTACGTCCTAAATTTGAACTGACTCTGGAAGAGAAATTGTACTACTGCTCTTGTATAAGAAGAAACAGGCACA AATACAGCTACGGGCGCCAGGCAAACCGAACGCTGAAGAATTTACTTGTACCGTCATTAGATTCTGTTCCTGCATGGGTA TATGGTGTGACAGGAAAAATAATATCTGAATTGTCTGAAAGTTGA
Upstream 100 bases:
>100_bases GAAGCATGGATTGAAACAGATTATTCTTCTCTTACTCAGGAAGTATTTGAGAGAGATGTGAAACGATACTTTTTATATAA GTTGATGCTGGATATACATA
Downstream 100 bases:
>100_bases GACTAAGAGGGCCGGAGGCCCGGTGAATGGCCTCCGGGTTATTTATATCAGAGTATATTGGCGATTGATTTTGCCAGCTG GTCTTCCAGATGAGGTTTAG
Product: putative Restriction enzyme subunit beta
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIRRLQMLLGNLFYIRNGISMSGMKVCHCSFPDSVPVLRPASTQERTIAGWINRASVDECNIYPAGALFVSTNGEGSHSY SYVSSFEFVCNTDISVLIPKKDMGLFEKIYYSRCITMNRYLFSYGRKPKGKRLKHIELPDIIPDWVMNLSASMNEVRDGF ELLMSGNVQGFNICCRHGNNYPEQKLIPLSELFDVNYGLNLELNKLEKDSSGINFVSRTSKNNGVSARVKLIDGISPLPA GVLTVAAGGSVMETFVQDSPFYSGRDLYWLRPKFELTLEEKLYYCSCIRRNRHKYSYGRQANRTLKNLLVPSLDSVPAWV YGVTGKIISELSES
Sequences:
>Translated_334_residues MIRRLQMLLGNLFYIRNGISMSGMKVCHCSFPDSVPVLRPASTQERTIAGWINRASVDECNIYPAGALFVSTNGEGSHSY SYVSSFEFVCNTDISVLIPKKDMGLFEKIYYSRCITMNRYLFSYGRKPKGKRLKHIELPDIIPDWVMNLSASMNEVRDGF ELLMSGNVQGFNICCRHGNNYPEQKLIPLSELFDVNYGLNLELNKLEKDSSGINFVSRTSKNNGVSARVKLIDGISPLPA GVLTVAAGGSVMETFVQDSPFYSGRDLYWLRPKFELTLEEKLYYCSCIRRNRHKYSYGRQANRTLKNLLVPSLDSVPAWV YGVTGKIISELSES >Mature_334_residues MIRRLQMLLGNLFYIRNGISMSGMKVCHCSFPDSVPVLRPASTQERTIAGWINRASVDECNIYPAGALFVSTNGEGSHSY SYVSSFEFVCNTDISVLIPKKDMGLFEKIYYSRCITMNRYLFSYGRKPKGKRLKHIELPDIIPDWVMNLSASMNEVRDGF ELLMSGNVQGFNICCRHGNNYPEQKLIPLSELFDVNYGLNLELNKLEKDSSGINFVSRTSKNNGVSARVKLIDGISPLPA GVLTVAAGGSVMETFVQDSPFYSGRDLYWLRPKFELTLEEKLYYCSCIRRNRHKYSYGRQANRTLKNLLVPSLDSVPAWV YGVTGKIISELSES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37707; Mature: 37707
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRLQMLLGNLFYIRNGISMSGMKVCHCSFPDSVPVLRPASTQERTIAGWINRASVDEC CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC NIYPAGALFVSTNGEGSHSYSYVSSFEFVCNTDISVLIPKKDMGLFEKIYYSRCITMNRY CCEECCEEEEEECCCCCCCCHHHHHEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHH LFSYGRKPKGKRLKHIELPDIIPDWVMNLSASMNEVRDGFELLMSGNVQGFNICCRHGNN HHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC YPEQKLIPLSELFDVNYGLNLELNKLEKDSSGINFVSRTSKNNGVSARVKLIDGISPLPA CCHHHCCCHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCC GVLTVAAGGSVMETFVQDSPFYSGRDLYWLRPKFELTLEEKLYYCSCIRRNRHKYSYGRQ CCEEEECCCHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCCHH ANRTLKNLLVPSLDSVPAWVYGVTGKIISELSES HHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHCC >Mature Secondary Structure MIRRLQMLLGNLFYIRNGISMSGMKVCHCSFPDSVPVLRPASTQERTIAGWINRASVDEC CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC NIYPAGALFVSTNGEGSHSYSYVSSFEFVCNTDISVLIPKKDMGLFEKIYYSRCITMNRY CCEECCEEEEEECCCCCCCCHHHHHEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHH LFSYGRKPKGKRLKHIELPDIIPDWVMNLSASMNEVRDGFELLMSGNVQGFNICCRHGNN HHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC YPEQKLIPLSELFDVNYGLNLELNKLEKDSSGINFVSRTSKNNGVSARVKLIDGISPLPA CCHHHCCCHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCC GVLTVAAGGSVMETFVQDSPFYSGRDLYWLRPKFELTLEEKLYYCSCIRRNRHKYSYGRQ CCEEEECCCHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCCHH ANRTLKNLLVPSLDSVPAWVYGVTGKIISELSES HHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA