| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691187
Identifier: 218691187
GI number: 218691187
Start: 3464521
End: 3465216
Strand: Direct
Name: 218691187
Synonym: ECED1_3539
Alternate gene names: NA
Gene position: 3464521-3465216 (Clockwise)
Preceding gene: 218691186
Following gene: 218691190
Centisome position: 66.5
GC content: 37.07
Gene sequence:
>696_bases ATGAAATCGAAATACAAAAAATTAAAAGATGAACTACTCAGAATAGCCAAAGCATGCGCCCCGACACCAGAAGATATGTT GGTATATACGGGAAGAGCCAGAAGACTTGCTTCATTTCTTAAAGATGCCAATATACAGATAAGTTCAGCAAATAGAATAA AACTACGTCATATTGAATGCTATTTTCAACAACGTTATCACACTGGCGTCAGTTCCAATATACTACGAGAAGAATTAGAT ACAATAAAGCATATTCTCACCCATTGCGGAAAGAGAAACATCGTTAAAAATGAACGACTGACTTATACATCACTGAATAT TGCAGATGTCCGACCAATTATAATCTGCCCATACTGTGGAAATAAGACGAATCTTATAAAAGGGTCTCTCATGACATATT CCATGTCAGCAGCGACAGAAAACAAATATTACTGGATTTGTCCCCCATGCAATGCATGGGTTGGATGCCATAAAAACTCA GGGAGACCATTAGGTACTCCGGCTAAAGAAAACCTGAGAATACTCAGAACAAAAGTACGTAAACTTTTTGACAATTATCA GCAAAGAACCAACATATCCCGTAACGGGGCAAACATATGGCTATCCAGAAAACTGAATTGTCACATTCAGGAATGTCATA TTGGGTATTTTAATGAAGATATGTGGCGCATCAGAAATCATCATAACCGAAATTAA
Upstream 100 bases:
>100_bases TGGATCTGGTAATAACCTACAACTGACTGACAAGGCCAGCTCAATTTGATATTTTTTAATTCAGTAACACTCTTTATAAA CCTGTAAGAGAGATGTAAAA
Downstream 100 bases:
>100_bases CAAAAACACATATCCTCCAGATTCATTTTAAATATCAGCTCTCATCAGAACCGTTAAAATAAACCTGTTTTACATAACGA CCTCTTCCGTCACCATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKSKYKKLKDELLRIAKACAPTPEDMLVYTGRARRLASFLKDANIQISSANRIKLRHIECYFQQRYHTGVSSNILREELD TIKHILTHCGKRNIVKNERLTYTSLNIADVRPIIICPYCGNKTNLIKGSLMTYSMSAATENKYYWICPPCNAWVGCHKNS GRPLGTPAKENLRILRTKVRKLFDNYQQRTNISRNGANIWLSRKLNCHIQECHIGYFNEDMWRIRNHHNRN
Sequences:
>Translated_231_residues MKSKYKKLKDELLRIAKACAPTPEDMLVYTGRARRLASFLKDANIQISSANRIKLRHIECYFQQRYHTGVSSNILREELD TIKHILTHCGKRNIVKNERLTYTSLNIADVRPIIICPYCGNKTNLIKGSLMTYSMSAATENKYYWICPPCNAWVGCHKNS GRPLGTPAKENLRILRTKVRKLFDNYQQRTNISRNGANIWLSRKLNCHIQECHIGYFNEDMWRIRNHHNRN >Mature_231_residues MKSKYKKLKDELLRIAKACAPTPEDMLVYTGRARRLASFLKDANIQISSANRIKLRHIECYFQQRYHTGVSSNILREELD TIKHILTHCGKRNIVKNERLTYTSLNIADVRPIIICPYCGNKTNLIKGSLMTYSMSAATENKYYWICPPCNAWVGCHKNS GRPLGTPAKENLRILRTKVRKLFDNYQQRTNISRNGANIWLSRKLNCHIQECHIGYFNEDMWRIRNHHNRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26998; Mature: 26998
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKYKKLKDELLRIAKACAPTPEDMLVYTGRARRLASFLKDANIQISSANRIKLRHIEC CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCEEEECCCEEEEEHHHH YFQQRYHTGVSSNILREELDTIKHILTHCGKRNIVKNERLTYTSLNIADVRPIIICPYCG HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCC NKTNLIKGSLMTYSMSAATENKYYWICPPCNAWVGCHKNSGRPLGTPAKENLRILRTKVR CCCCEEECHHHEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH KLFDNYQQRTNISRNGANIWLSRKLNCHIQECHIGYFNEDMWRIRNHHNRN HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKSKYKKLKDELLRIAKACAPTPEDMLVYTGRARRLASFLKDANIQISSANRIKLRHIEC CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCEEEECCCEEEEEHHHH YFQQRYHTGVSSNILREELDTIKHILTHCGKRNIVKNERLTYTSLNIADVRPIIICPYCG HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCC NKTNLIKGSLMTYSMSAATENKYYWICPPCNAWVGCHKNSGRPLGTPAKENLRILRTKVR CCCCEEECHHHEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH KLFDNYQQRTNISRNGANIWLSRKLNCHIQECHIGYFNEDMWRIRNHHNRN HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA