Click here to switch to the map view.

The map label for this gene is yubA [H]

Identifier: 218691177

GI number: 218691177

Start: 3457619

End: 3458599

Strand: Reverse

Name: yubA [H]

Synonym: ECED1_3529

Alternate gene names: 218691177

Gene position: 3458599-3457619 (Counterclockwise)

Preceding gene: 218691178

Following gene: 218691176

Centisome position: 66.39

GC content: 55.35

Gene sequence:

>981_bases
ATGCCCTCTTCATTTATCAGAGGAGCATTGAATATGGCCGAATGGTGCAGAAATCGTTTTGAAATTACCGGTAAGTCAGT
CTGCCTGGATGTGCTGACGCAGTGGATTGAAGGATGTGAGACACCGCGTTACCGCCATGCCATACAGCAGAGTATACAGC
TGTTTCTGATCGGTTGTGCCGGACTGGTGAAACCTACCCGGACGACGCAGTATCCGCCATATCCGGCGCTGGTTCGTCAT
GGTACGGGGATGTCATCTCCGGCTAACCAGGCATTTGAACAGTGGCTGGGGCTGCTGGTAAAAGATGCCGTACTGGATGA
AGAGACGATAAAGACCATTGACCGCCTTTATCACCAGTCATGTATTGGCGCAGTCCGCTGGGGGAATCTGCCGGATAATG
CCCGGGAGATAATCACCACGTTAATGCATTGTCAGTATTCTGACTGGTTTGGTCTGGTCGGACTGAGTGAACACATTGAT
GCCGAAGCCTGCTGGAGCCGGCTGTCGGATTACCCGGAACAGGCGCAGCCCTGTGACATGCTGATGGTCATACCCCCCCG
TCTGGCCACAGAGCTGAACGGTTCAGGTGGACTGCTGCAGGGCATTTCCACCACGACCAGCCTTTACAGCCGGATATACG
GTGTGGAGTGGCCATCAGGTCACAATGTCCGCTGGGTGCGTGATGAGATGAGCAGTCTGGTGCTGCTGACAGACACGCCC
TGGTATCCGCCTTCAGGTGAGCTGGTTGGTGAAATCTCGAAGGTGTTCGACTGTGAGATACGGCACTGGTACAGCGAACC
TGTCCGGGGCATACAGGGTTACAACTGTTATGACGGTGGTGAACATACGGACAGTGACCCGCAGGCCGAATGGCCGGGGA
GGGAAAAACTTCCACAGCCCCGGCTGTATCTGGTGGAGGAGCGCGCTGAAGAACAGACAGAAGCCGCGCCTTTACCGGTT
CCGCTGGCTGCAGGCCAGTAA

Upstream 100 bases:

>100_bases
CCAGTAAATACCGGAAGGTTGTATAACCGGACGGACTTTTGACGATGGCGGAGTGTGACAACTCCGCTTTTCCCGTGAGG
GCATTGTACCTCACGGGACA

Downstream 100 bases:

>100_bases
CTAACCTCAGGGTGCCACATTCGCGGCACCCGTTTTTTCCTGTCATCTATCATTTCAGCCCGAAGGGGAACTCTTGTTCC
TCCCCGGGGCCATGTGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MPSSFIRGALNMAEWCRNRFEITGKSVCLDVLTQWIEGCETPRYRHAIQQSIQLFLIGCAGLVKPTRTTQYPPYPALVRH
GTGMSSPANQAFEQWLGLLVKDAVLDEETIKTIDRLYHQSCIGAVRWGNLPDNAREIITTLMHCQYSDWFGLVGLSEHID
AEACWSRLSDYPEQAQPCDMLMVIPPRLATELNGSGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLVLLTDTP
WYPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTDSDPQAEWPGREKLPQPRLYLVEERAEEQTEAAPLPV
PLAAGQ

Sequences:

>Translated_326_residues
MPSSFIRGALNMAEWCRNRFEITGKSVCLDVLTQWIEGCETPRYRHAIQQSIQLFLIGCAGLVKPTRTTQYPPYPALVRH
GTGMSSPANQAFEQWLGLLVKDAVLDEETIKTIDRLYHQSCIGAVRWGNLPDNAREIITTLMHCQYSDWFGLVGLSEHID
AEACWSRLSDYPEQAQPCDMLMVIPPRLATELNGSGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLVLLTDTP
WYPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTDSDPQAEWPGREKLPQPRLYLVEERAEEQTEAAPLPV
PLAAGQ
>Mature_325_residues
PSSFIRGALNMAEWCRNRFEITGKSVCLDVLTQWIEGCETPRYRHAIQQSIQLFLIGCAGLVKPTRTTQYPPYPALVRHG
TGMSSPANQAFEQWLGLLVKDAVLDEETIKTIDRLYHQSCIGAVRWGNLPDNAREIITTLMHCQYSDWFGLVGLSEHIDA
EACWSRLSDYPEQAQPCDMLMVIPPRLATELNGSGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLVLLTDTPW
YPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTDSDPQAEWPGREKLPQPRLYLVEERAEEQTEAAPLPVP
LAAGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023136
- InterPro:   IPR009694 [H]

Pfam domain/function: PF06924 DUF1281 [H]

EC number: NA

Molecular weight: Translated: 36700; Mature: 36569

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSFIRGALNMAEWCRNRFEITGKSVCLDVLTQWIEGCETPRYRHAIQQSIQLFLIGCA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GLVKPTRTTQYPPYPALVRHGTGMSSPANQAFEQWLGLLVKDAVLDEETIKTIDRLYHQS
HHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
CIGAVRWGNLPDNAREIITTLMHCQYSDWFGLVGLSEHIDAEACWSRLSDYPEQAQPCDM
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCE
LMVIPPRLATELNGSGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLVLLTDTP
EEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCEEEEECCC
WYPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTDSDPQAEWPGREKLPQP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RLYLVEERAEEQTEAAPLPVPLAAGQ
CEEHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PSSFIRGALNMAEWCRNRFEITGKSVCLDVLTQWIEGCETPRYRHAIQQSIQLFLIGCA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GLVKPTRTTQYPPYPALVRHGTGMSSPANQAFEQWLGLLVKDAVLDEETIKTIDRLYHQS
HHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
CIGAVRWGNLPDNAREIITTLMHCQYSDWFGLVGLSEHIDAEACWSRLSDYPEQAQPCDM
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCE
LMVIPPRLATELNGSGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLVLLTDTP
EEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCEEEEECCC
WYPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTDSDPQAEWPGREKLPQP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RLYLVEERAEEQTEAAPLPVPLAAGQ
CEEHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10366527 [H]