| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691175
Identifier: 218691175
GI number: 218691175
Start: 3455947
End: 3456684
Strand: Reverse
Name: 218691175
Synonym: ECED1_3527
Alternate gene names: NA
Gene position: 3456684-3455947 (Counterclockwise)
Preceding gene: 218691176
Following gene: 218691174
Centisome position: 66.35
GC content: 36.31
Gene sequence:
>738_bases TTGCAAGTGCCAATAAAAAATAAACTGGGGTTTATTTCAATGAAGGTTGTGTTTAATGTAATGGATGGTTTTGATAAGAC TTTTTTGCCCCTGGAGTTTTCTGGTTTTCATGGCCGGAATGGGTACTGTTATTTAAGGGTTCAGATTAAACATGGATTTA TTGTTTTCTCATGCGCTCAATTATTGAACTATTATCGTACGTCAGTAACAAATGCAATTGAGCAGGTCAGAGAGGCTGCG GTTAATGCTCTCTTCAGGGAGGGGGTATTGTCATACACGCAGCAAAAAGAATTTCTGGATATATTAAAAACATCACAACG AGTAGATAAAGAAATTGATTCGCAATTATGGGATTACATAAATGCTAATTCAATATGGTTTGAATACTATAACCATAATG AATCATTGTTTCTGAATGATCACTTTCATATCGCCTCTTTTGAGGGAAACAGGAATCCACTGTGGAAGAAAACTTCACTG GAGGATTTAGAGAGAGCATATCCTGAGTTTGACTTTGTTATTCATAAACATCATCTTGAAAAATGGATTAATGGAGGACT TAGTCCTGAAAATGTAAAAAAGACAATAAAAGAAAAAGGCTGGAGCAACAAGATGTTGGCTGCGCGCTGGGGGTGCACAG AGGTATGGGTGAGTAAAATCATTAACGATGAAAATAGAAAGGTTCAGTGGAATGATGCTATTAATGGGCTTCCTGTGATA AGTGATAATATGATTTGA
Upstream 100 bases:
>100_bases CAGGACTGGCGTTATTACATCTGTGGGTCAATTTTTGTTATTTTTTTTATGGTTATGTAAGTGGTGTTGACAGGTTACTC TTGTTTTTTAAACTCAAGGA
Downstream 100 bases:
>100_bases TGTGTAATCATGCTTCACCAGCATAAGGCAAGAAGATTATTAATATATACTGGATGTAGTTCGCATCAGAGCGTTTCTGG TTTAAGTGAATAACTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MQVPIKNKLGFISMKVVFNVMDGFDKTFLPLEFSGFHGRNGYCYLRVQIKHGFIVFSCAQLLNYYRTSVTNAIEQVREAA VNALFREGVLSYTQQKEFLDILKTSQRVDKEIDSQLWDYINANSIWFEYYNHNESLFLNDHFHIASFEGNRNPLWKKTSL EDLERAYPEFDFVIHKHHLEKWINGGLSPENVKKTIKEKGWSNKMLAARWGCTEVWVSKIINDENRKVQWNDAINGLPVI SDNMI
Sequences:
>Translated_245_residues MQVPIKNKLGFISMKVVFNVMDGFDKTFLPLEFSGFHGRNGYCYLRVQIKHGFIVFSCAQLLNYYRTSVTNAIEQVREAA VNALFREGVLSYTQQKEFLDILKTSQRVDKEIDSQLWDYINANSIWFEYYNHNESLFLNDHFHIASFEGNRNPLWKKTSL EDLERAYPEFDFVIHKHHLEKWINGGLSPENVKKTIKEKGWSNKMLAARWGCTEVWVSKIINDENRKVQWNDAINGLPVI SDNMI >Mature_245_residues MQVPIKNKLGFISMKVVFNVMDGFDKTFLPLEFSGFHGRNGYCYLRVQIKHGFIVFSCAQLLNYYRTSVTNAIEQVREAA VNALFREGVLSYTQQKEFLDILKTSQRVDKEIDSQLWDYINANSIWFEYYNHNESLFLNDHFHIASFEGNRNPLWKKTSL EDLERAYPEFDFVIHKHHLEKWINGGLSPENVKKTIKEKGWSNKMLAARWGCTEVWVSKIINDENRKVQWNDAINGLPVI SDNMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28723; Mature: 28723
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVPIKNKLGFISMKVVFNVMDGFDKTFLPLEFSGFHGRNGYCYLRVQIKHGFIVFSCAQ CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEEEECCCHHHHHHH LLNYYRTSVTNAIEQVREAAVNALFREGVLSYTQQKEFLDILKTSQRVDKEIDSQLWDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NANSIWFEYYNHNESLFLNDHFHIASFEGNRNPLWKKTSLEDLERAYPEFDFVIHKHHLE CCCEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH KWINGGLSPENVKKTIKEKGWSNKMLAARWGCTEVWVSKIINDENRKVQWNDAINGLPVI HHHCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC SDNMI CCCCC >Mature Secondary Structure MQVPIKNKLGFISMKVVFNVMDGFDKTFLPLEFSGFHGRNGYCYLRVQIKHGFIVFSCAQ CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEEEECCCHHHHHHH LLNYYRTSVTNAIEQVREAAVNALFREGVLSYTQQKEFLDILKTSQRVDKEIDSQLWDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NANSIWFEYYNHNESLFLNDHFHIASFEGNRNPLWKKTSLEDLERAYPEFDFVIHKHHLE CCCEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH KWINGGLSPENVKKTIKEKGWSNKMLAARWGCTEVWVSKIINDENRKVQWNDAINGLPVI HHHCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC SDNMI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA