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The map label for this gene is ygfT [H]

Identifier: 218691012

GI number: 218691012

Start: 3294525

End: 3296444

Strand: Reverse

Name: ygfT [H]

Synonym: ECED1_3346

Alternate gene names: 218691012

Gene position: 3296444-3294525 (Counterclockwise)

Preceding gene: 218691015

Following gene: 218691011

Centisome position: 63.28

GC content: 52.92

Gene sequence:

>1920_bases
ATGAATAAGTTTATCGCTGCTGAAGCTGCGGAATGTATAGGCTGCCATGCTTGTGAAATTGCCTGTGCGGTGGCACATAA
TCAAGAAAACTGGCCGCTGAGTCACAGTGACTTTCGACCGCGTATCCACGTTGTAGGGAAAGGCCAGGCTGCGAATCCGG
TGGCCTGCCATCATTGCAACAATGCCCCCTGCGTTACGGCTTGTCCGGTTTATGCTCTGACTTTTCAGGCTGATAGCGTA
CAACTGAACGAACAAAAATGTATTGGTTGTAAAAGATGCGCAATCGCTTGCCCCTTTGGCGTCGTTGAGATGGTCGATAC
GATTGCGCAGAAATGCGACCTTTGTAACCAGCGCAGTTCCGGCACGCAAGCCTGTATTGACGTCTGCCCAACACAGGCGT
TACGGCTGATGGACGATAAAGGGTTGCAGCAGATAAAGGTGGCCCGCCAGCGCAAAACGGCAGCAGGAAAAGCGTCATCA
GGCGCTCAGCCATCTCGCAGTGCAGCGTTGCTCCCCGTTAACTCGCGTAAAGGCGCAGATAAAATTTCAGCGAGTGAACG
GAAAACCCACTTTGGCGAAATCTATTGCGGGCTGGATCCACAACAAGCGACTTATGAGAGTGACCGCTGTGTTTATTGTG
CCGAAAAAGCTAACTGCAACTGGCATTGCCCGCTGCATAACGCTATTCCGGATTACATCCGTCTGGTACAGGAAGGAAAG
ATTATTGAAGCGGCAGAACTTTGCCACCAGACCAGTTCCTTACCCGAAATCTGCGGCAGGGTATGTCCACAGGACCGTCT
TTGTGAAGGCGCATGTACTTTGAAAGATCACTCTGGCGCAGTCTCTATCGGTAATCTGGAACGCTACATCACCGATACTG
CGCTGGCGATGGGCTGGCGTCCCGATGTCAGCAAAGTTGTTCCCCGTAGCGAAAAAGTGGCGGTGATTGGCGCTGGACCT
GCAGGATTAGGGTGTGCTGATATTCTGGCGCGCGCGGGAGTTCAGGTTGATGTCTTTGATCGCCATCCAGAAATTGGCGG
TATGCTGACTTTTGGCATTCCTCCTTTCAAACTCGATAAAACGGTATTAAGCCAGCGGCGAGAGATATTCACCGCAATGG
GAATCGATTTCCATCTCAACTGTGAAATTGGCCGCGATATCTCTTTCAACGAATTAACGGCGGAATATGATGCTGTTTTC
CTCGGCGTGGGGACTTACGGGATGATGCGAGCAGATCTGCCGCATGAAGATGCGCCTGGTGTCATTCAGGCGTTACCGTT
CCTGACCGCCCATACCCGCCAGCTCATGGGATTGCCGGAGTCTGCAGAGTATCCGCTGACGGATGTGGAAGGTAAGCGAG
TTGTGGTATTGGGCGGTGGCGATACGACAATGGATTGTTTGCGGACTTCCATCCGCCTTAATGCTGCCAGCGTGACCTGT
GCGTATCGTCGTGATGAAGTCAGTATGCCGGGTTCGCGCAAAGAGGTGGTCAATGCCCGCGAGGAAGGTGTTGAGTTTCA
GTTCAATGTTCAGCCGCAATATATCGCTTGTGATGAAGATGGACGCTTAACGGCGGTGGGCCTGATTCGTACCGCTATGG
GTGAGCCGGGGCCGGATGGCCGCCGTCGTCCTCGTCCGGTTGCGGGTTCAGAGTTTGAATTGCCCGCCGATGTTCTCATT
ATGGCCTTTGGTTTCCAGGCACATACCATGCCGTGGTTGCAGGGCAGCGGAATTAAACTCGATAAATGGGGCCTGATTCA
AACCGGCGACGTCGGGTATTTACCTACCCAGACGCATCTGAAAAAAGTCTTTGCTGGTGGTGATGCAGTTCATGGCGCGG
ATCTGGTTGTCACTGCAATGGCCGCAGGAAGGCAGGCGGCGCGCGATATGTTAACTCTGTTTGATACGAAGGCATCGTGA

Upstream 100 bases:

>100_bases
TGCAAAATTATAATTAAAACGGTCATGCTACCTAATATATGCCCGTTTATTGCATCGCGAAATTTGAGAAGACATAACTC
ATTAAATGAAAGGGATGCAA

Downstream 100 bases:

>100_bases
TGAAATCGTTAATTATCGTTAATCCGGCTGACTGTATTGGCTGCCGTACTTGTGAAGTGGCCTGTGTGGTCGCTCACCCT
TCAGAACAGGAGTTGAATGC

Product: putative oxidoreductase Fe-S binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCNNAPCVTACPVYALTFQADSV
QLNEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSSGTQACIDVCPTQALRLMDDKGLQQIKVARQRKTAAGKASS
GAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGK
IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGP
AGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDISFNELTAEYDAVF
LGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESAEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTC
AYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLI
MAFGFQAHTMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS

Sequences:

>Translated_639_residues
MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCNNAPCVTACPVYALTFQADSV
QLNEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSSGTQACIDVCPTQALRLMDDKGLQQIKVARQRKTAAGKASS
GAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGK
IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGP
AGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDISFNELTAEYDAVF
LGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESAEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTC
AYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLI
MAFGFQAHTMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS
>Mature_639_residues
MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCNNAPCVTACPVYALTFQADSV
QLNEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSSGTQACIDVCPTQALRLMDDKGLQQIKVARQRKTAAGKASS
GAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGK
IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGP
AGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDISFNELTAEYDAVF
LGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESAEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTC
AYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLI
MAFGFQAHTMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Homo sapiens, GI119943098, Length=469, Percent_Identity=30.0639658848614, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI111118983, Length=271, Percent_Identity=26.1992619926199, Blast_Score=73, Evalue=1e-12,
Organism=Homo sapiens, GI111118981, Length=162, Percent_Identity=30.2469135802469, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87082180, Length=639, Percent_Identity=98.1220657276995, Blast_Score=1303, Evalue=0.0,
Organism=Escherichia coli, GI1788811, Length=656, Percent_Identity=54.7256097560976, Blast_Score=732, Evalue=0.0,
Organism=Escherichia coli, GI1789606, Length=450, Percent_Identity=59.3333333333333, Blast_Score=559, Evalue=1e-160,
Organism=Escherichia coli, GI1788468, Length=449, Percent_Identity=28.9532293986637, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI1789243, Length=428, Percent_Identity=33.411214953271, Blast_Score=160, Evalue=3e-40,
Organism=Escherichia coli, GI87082179, Length=163, Percent_Identity=46.0122699386503, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI2367245, Length=156, Percent_Identity=44.2307692307692, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1789067, Length=173, Percent_Identity=39.3063583815029, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI87082114, Length=203, Percent_Identity=33.9901477832512, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1789079, Length=189, Percent_Identity=34.3915343915344, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI2367345, Length=166, Percent_Identity=33.1325301204819, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570289, Length=446, Percent_Identity=31.1659192825112, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71984108, Length=527, Percent_Identity=28.6527514231499, Blast_Score=154, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17543860, Length=254, Percent_Identity=29.5275590551181, Blast_Score=93, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6320030, Length=461, Percent_Identity=32.3210412147505, Blast_Score=198, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24665547, Length=485, Percent_Identity=33.4020618556701, Blast_Score=224, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24665543, Length=485, Percent_Identity=33.4020618556701, Blast_Score=224, Evalue=2e-58,
Organism=Drosophila melanogaster, GI28574881, Length=475, Percent_Identity=33.8947368421053, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24665539, Length=475, Percent_Identity=33.8947368421053, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24640763, Length=469, Percent_Identity=27.9317697228145, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI18858217, Length=469, Percent_Identity=27.9317697228145, Blast_Score=138, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR006006
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00037 Fer4; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 69033; Mature: 69033

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCN
CCCCCHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCC
NAPCVTACPVYALTFQADSVQLNEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSS
CCCCEEECCEEEEEEECCCEEECHHHCCCHHHHEEECCHHHHHHHHHHHHHHHHHCCCCC
GTQACIDVCPTQALRLMDDKGLQQIKVARQRKTAAGKASSGAQPSRSAALLPVNSRKGAD
CCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
KISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGK
CCCCHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCC
IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWR
EEHHHHHHHHCCCHHHHHHHHCCHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHCCCC
PDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDK
CCHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCHHHH
TVLSQRREIFTAMGIDFHLNCEIGRDISFNELTAEYDAVFLGVGTYGMMRADLPHEDAPG
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCEEEEECCCCCEEECCCCCCCCCC
VIQALPFLTAHTRQLMGLPESAEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTC
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHEEECEEEEE
AYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDG
EEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEECCCCCEEHHHHHHHHCCCCCCCC
RRRPRPVAGSEFELPADVLIMAFGFQAHTMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHL
CCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCHHHH
KKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCN
CCCCCHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCC
NAPCVTACPVYALTFQADSVQLNEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSS
CCCCEEECCEEEEEEECCCEEECHHHCCCHHHHEEECCHHHHHHHHHHHHHHHHHCCCCC
GTQACIDVCPTQALRLMDDKGLQQIKVARQRKTAAGKASSGAQPSRSAALLPVNSRKGAD
CCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
KISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGK
CCCCHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCC
IIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWR
EEHHHHHHHHCCCHHHHHHHHCCHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHCCCC
PDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDK
CCHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCHHHH
TVLSQRREIFTAMGIDFHLNCEIGRDISFNELTAEYDAVFLGVGTYGMMRADLPHEDAPG
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCEEEEECCCCCEEECCCCCCCCCC
VIQALPFLTAHTRQLMGLPESAEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTC
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHEEECEEEEE
AYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDG
EEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEECCCCCEEHHHHHHHHCCCCCCCC
RRRPRPVAGSEFELPADVLIMAFGFQAHTMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHL
CCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCHHHH
KKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]