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The map label for this gene is ygfM [H]

Identifier: 218691006

GI number: 218691006

Start: 3286053

End: 3286832

Strand: Direct

Name: ygfM [H]

Synonym: ECED1_3340

Alternate gene names: 218691006

Gene position: 3286053-3286832 (Clockwise)

Preceding gene: 218691005

Following gene: 218691007

Centisome position: 63.08

GC content: 53.85

Gene sequence:

>780_bases
ATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAGGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTG
GTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGC
TGGACTGGATTGACTGGGATAACGGTGCACTACGAATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTT
ATTCCTGCAGCACTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAAT
CGCCGCCCGGCAAGAAGAGTCAGTGCTGCTTCCCGTCCTGCTGGCACTGGATGCTGAACTGGTTTTTGGCAACGGCGAAA
CGCTGTCAATCGAGGACTACCTGGCCTGCCCATGCGATCGCCTGTTAACCGAAATTATCATTAAAGATCCGTATCGCACC
TGTGCGACTCGCAAAATTAGCCGTTCTCAGGCAGGTTTAACCGTCGTGACGGCAGCCGTTGCAATAACAGACCACGACGG
TATGCGAATTGCGCTGGATGGCGTCGCCAGTAAAGCACTGCGTCTGCACGATGTCGAAACTCAAAATCTGGAAGGCAATG
CACTTGAACAGGCTGTCGCCAACGCCATTTTCCCGCAGGAAGATTTGCGGGGCAGCGTGGCCTATAAACGCTATATCACG
GGAGTTCTGGTAGCCGATCTGTATGCCGACTGCCAACAGGCTGGGGAGGAAGCCGTATGA

Upstream 100 bases:

>100_bases
CCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGA
GGGGAAATTAAGGAAAGACG

Downstream 100 bases:

>100_bases
TCATCCACTTTACTTTAAATGGCGCGCCTCAGGAGCTAACCGTTAATCCAGGCGAAAACGTGCAAAAGCTGTTGTTTAAC
ATGGGAATGCACTCTGTACG

Product: putative selenate reductase subunit YgfM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWDNGALRIGAMSRLQPLRDARF
IPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
CATRKISRSQAGLTVVTAAVAITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
GVLVADLYADCQQAGEEAV

Sequences:

>Translated_259_residues
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWDNGALRIGAMSRLQPLRDARF
IPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
CATRKISRSQAGLTVVTAAVAITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
GVLVADLYADCQQAGEEAV
>Mature_259_residues
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWDNGALRIGAMSRLQPLRDARF
IPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
CATRKISRSQAGLTVVTAAVAITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
GVLVADLYADCQQAGEEAV

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789245, Length=259, Percent_Identity=98.8416988416988, Blast_Score=524, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346
- InterPro:   IPR017698 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: NA

Molecular weight: Translated: 28619; Mature: 28619

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWD
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECC
NGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL
CCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHH
LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV
HHCCCEEEECCCCEEEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE
AITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
EEECCCCCEEEEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHH
GVLVADLYADCQQAGEEAV
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWD
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECC
NGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL
CCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHH
LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV
HHCCCEEEECCCCEEEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE
AITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
EEECCCCCEEEEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHH
GVLVADLYADCQQAGEEAV
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]