| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690986
Identifier: 218690986
GI number: 218690986
Start: 3261871
End: 3262386
Strand: Reverse
Name: 218690986
Synonym: ECED1_3319
Alternate gene names: NA
Gene position: 3262386-3261871 (Counterclockwise)
Preceding gene: 218690987
Following gene: 218690985
Centisome position: 62.62
GC content: 50.39
Gene sequence:
>516_bases ATGAAACGTCCGAATATGCCCGTACAGGGGCAGGGCTTCGTTCAGCCTGAAATCAACCAGAACGATATATTGATTCGCCA CAAAGCAGAGTCGCGTATTGATTCCCGCGTTATTTCTGAGCGAGCAGGAATACAACACGAAAGTCTTTGCGCGACGATCA AAAAACATCAGCAGCAGTTACGCGATCTGGGAGCATTGCCTCGCTATAGTCTGAAATCAGGCCATAAGCGCGGTCGCCCA GAAATGCGCTATATGCTGAATGAAATGCAACATGATTACTTGTTACGCATTGTTCGCGGTCGTAACCCAGAACATATGCG CCACCTCAAGCAGGACGAAACAAAACACCGCTTTCATTTGTTGTCAGTTGTACAAGAAATCGGGATATCGGCTTTTAACG AGGCGATACAGAACGGCATGACACCGACCGAAGCGGTGCGGGAAGTTGCTCGCCGCATGGAGACGTTCGCCAGCCTGATG ACGTCAGCGCCGTCTCTGGGGGTGAATCATGCGTAA
Upstream 100 bases:
>100_bases CAGCGTATTGATGCTTCTCGCAACAACGCCGCGTAATAATCTTTTGGGAGGGGGATATTCTCCCCCAGCACTAAACCTGA TCCGATAGCAGGAGTTTTCA
Downstream 100 bases:
>100_bases TTATGATTTCGCCGCAATTATTTCGGTAATTTCCGGCAATGAGATTATTGCTGACGGAATAAATAAAAATGCACTCACTG CGCCGGAAGTGTTTCCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKRPNMPVQGQGFVQPEINQNDILIRHKAESRIDSRVISERAGIQHESLCATIKKHQQQLRDLGALPRYSLKSGHKRGRP EMRYMLNEMQHDYLLRIVRGRNPEHMRHLKQDETKHRFHLLSVVQEIGISAFNEAIQNGMTPTEAVREVARRMETFASLM TSAPSLGVNHA
Sequences:
>Translated_171_residues MKRPNMPVQGQGFVQPEINQNDILIRHKAESRIDSRVISERAGIQHESLCATIKKHQQQLRDLGALPRYSLKSGHKRGRP EMRYMLNEMQHDYLLRIVRGRNPEHMRHLKQDETKHRFHLLSVVQEIGISAFNEAIQNGMTPTEAVREVARRMETFASLM TSAPSLGVNHA >Mature_171_residues MKRPNMPVQGQGFVQPEINQNDILIRHKAESRIDSRVISERAGIQHESLCATIKKHQQQLRDLGALPRYSLKSGHKRGRP EMRYMLNEMQHDYLLRIVRGRNPEHMRHLKQDETKHRFHLLSVVQEIGISAFNEAIQNGMTPTEAVREVARRMETFASLM TSAPSLGVNHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19708; Mature: 19708
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPNMPVQGQGFVQPEINQNDILIRHKAESRIDSRVISERAGIQHESLCATIKKHQQQL CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RDLGALPRYSLKSGHKRGRPEMRYMLNEMQHDYLLRIVRGRNPEHMRHLKQDETKHRFHL HHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSVVQEIGISAFNEAIQNGMTPTEAVREVARRMETFASLMTSAPSLGVNHA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKRPNMPVQGQGFVQPEINQNDILIRHKAESRIDSRVISERAGIQHESLCATIKKHQQQL CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RDLGALPRYSLKSGHKRGRPEMRYMLNEMQHDYLLRIVRGRNPEHMRHLKQDETKHRFHL HHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSVVQEIGISAFNEAIQNGMTPTEAVREVARRMETFASLMTSAPSLGVNHA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA