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The map label for this gene is 218690979

Identifier: 218690979

GI number: 218690979

Start: 3257092

End: 3258912

Strand: Reverse

Name: 218690979

Synonym: ECED1_3311

Alternate gene names: NA

Gene position: 3258912-3257092 (Counterclockwise)

Preceding gene: 218690980

Following gene: 218690978

Centisome position: 62.56

GC content: 51.24

Gene sequence:

>1821_bases
ATGAAAAGCGCACCGAACTTAAAAAAACAGCCGCGAGGGAAAAAACACGCCGATACGGAAGTGATTATTTTCGCTGGCAG
TGATGCGTGGGCGCACGCGAAACAGTGGCAGGAGCAGGAGGGACGACTTGCAGGTGATGATGTTCCGCCAGTCGTGCTTT
CTGATGAACAACTTAAGGATATTGGCAATCTGAAAATTGTGCCCGACGGGCGCAAATCAGCGCGTATATACAAGGCCGGA
CACCTCGATCAGATGATGGTCAAAGGCATCGGTCAGAAGCTGGCAGCCGCAGGTATACAGGATGCTGATTACTACCCTGA
AGGAATGCACCACAACGAGCGGCAGAACTGGCGTAACTATCTGGATATTGAACGCAAAAACATTTCTGACGGGCTGGTTA
TTGAGCTGCCTGTAAAGAAAAAAGCGCGGGGACAGGGTGATGATTCGTCACTGGCACTTAACCAGATGGGGGCCAGCCAG
CGTGGCAGGGTTCTTCTTGCTCATTACGGAGGGGAACTGGCAATAAACCCTGACTCTGACACAGTTCACTATTACAACGG
GGTTATATGGTCCCCCGTGCAGGACAAAGAGCTACAGCGCACAATGGCGCAAATCTTCATTGACGAAGATATCTGCTATT
CACAAAACGCCATTAAATCGGCAGTTGACACAATGAAGTTAAGTTTACCCGTAATGGGTAATACCGCCCGTCACCTGATT
GGATTCAGCAACGGGGTATTTGATACCCGTACAGGTGATTTTCGGGAACACGATAAAGATGACTGGCTGTTAATTGCCAG
TGAGTTACCGTTCACTCCACCAGCAGAGGGTGAAACGCTGGCAACACATGCGCCGAATTTCTGGAAATGGTTGCGCCGTT
CGGTGGCAGAGAATGACCGCAAGGCGGATCGCGTACTGGCAGCGTTATTTATGGTGCTGGCGAACCGGTACGACTGGCAG
TTATTCATTGAGGTAACTGGTCCTGGTGGAAGCGGTAAAAGCGTTATGGCGGAGATTTGTACCATGCTGGCGGGTAAGGC
CAACACGGTATCGGCAAGCATGAAGGCACTGGAGGATGCAAGGGAACGCGCGTTAGTGGTTGGCTTTTCACTGATTATTC
TGCCGGATATGACCCGCTACGCGGGTGATGGAGCAGGAATAAAGGCCATTACGGGCGGTGACAAGGTGGCAATTGACCCG
AAACACAAAGCGCCATACTCAACGCGTATTCCGGCGGTAGTGCTGGCGGTTAACAACAGCGCCATGTCATTCAGTGACCG
CAGCGGGGGGATCTCGCGTCGTCGTGTGATATTCAATTTTTCGGAGGTTGTACCGGAAAACGAGCGCGATCCGATGCTGC
CGGAAAAAATAGAGGGTGAGCTTGCTGTAGTGATTCGTCATCTGCTTACGCGCTTTTCTGACCAGGACGAAGCCAGACGC
CTGTTACATGAGCAGCAGAAATCAGAAGAAGCCCTTGCAATAAAGCGTGAGGGGGATTCGCTGGTGGACTTCTGCGGCTA
TCTCATGTCGTCGGTAATGTGTGACGGCCTGTTAGTCGGTAATGCTGAGATTATTCCGTTCAGTCCGCGCCGTTATCTCT
ATCACGCCTATCTCTCGTATATGAGGGCGCACGGTTTCAGTAAGCCCGTAACACTGACGCGCTTCGGTGCAGATATGCCA
GGCGCAATGGCGGAATATGGCAGGGAGTATATGAAAAAGAGAACGAAAGAAGGTGTGCGATCAAACGTGATACTGATGGA
TGAGTCTGAGGACTGGCTGCCGTCATGTGCACCAGTGAAAAATGAGGGTGATAAAAATTAA

Upstream 100 bases:

>100_bases
TTTCCCTGGTGCAGGCCGTACCACGTCGTAGCCCAACCAGCAACAACAAAGCAAAGGCGCATGTTAAGGCCATGAAGAAG
ACGATCAGCAGAGGTAAGAA

Downstream 100 bases:

>100_bases
GTTATAGAAAAACTGTTCACCGCTGTTCACCCTGTGACAAATACATTTGATATCAGTAAGTTAATGGGTGAATAGTTTTG
TAAAACTATTCACCGGAGTG

Product: putative DNA primase from prophage

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; Primase; Bacteriophage P4 DNA Primase; Phage/Plasmid Primase; Plasmid And Phage DNA Primase; P4-Specific DNA Primase; DNA Primase Prophage; D5 N Like Family; Phage Primase; P4 Family Phage/Plasmid Primase; Phage DNA Primase; Phage DNA Primase-Like Protein; Phage/Plasmid Primase P4-Like Protein; Helicase Superfamily Protein; Nucleic Acid Independent Nucleoside Triphosphatase; Plasmid/Phage Primase; Nucleoside Triphosphatase; Bacteriophage Protein; Alpha Replication I; Nucleoside Triphosphatase D5 Family

Number of amino acids: Translated: 606; Mature: 606

Protein sequence:

>606_residues
MKSAPNLKKQPRGKKHADTEVIIFAGSDAWAHAKQWQEQEGRLAGDDVPPVVLSDEQLKDIGNLKIVPDGRKSARIYKAG
HLDQMMVKGIGQKLAAAGIQDADYYPEGMHHNERQNWRNYLDIERKNISDGLVIELPVKKKARGQGDDSSLALNQMGASQ
RGRVLLAHYGGELAINPDSDTVHYYNGVIWSPVQDKELQRTMAQIFIDEDICYSQNAIKSAVDTMKLSLPVMGNTARHLI
GFSNGVFDTRTGDFREHDKDDWLLIASELPFTPPAEGETLATHAPNFWKWLRRSVAENDRKADRVLAALFMVLANRYDWQ
LFIEVTGPGGSGKSVMAEICTMLAGKANTVSASMKALEDARERALVVGFSLIILPDMTRYAGDGAGIKAITGGDKVAIDP
KHKAPYSTRIPAVVLAVNNSAMSFSDRSGGISRRRVIFNFSEVVPENERDPMLPEKIEGELAVVIRHLLTRFSDQDEARR
LLHEQQKSEEALAIKREGDSLVDFCGYLMSSVMCDGLLVGNAEIIPFSPRRYLYHAYLSYMRAHGFSKPVTLTRFGADMP
GAMAEYGREYMKKRTKEGVRSNVILMDESEDWLPSCAPVKNEGDKN

Sequences:

>Translated_606_residues
MKSAPNLKKQPRGKKHADTEVIIFAGSDAWAHAKQWQEQEGRLAGDDVPPVVLSDEQLKDIGNLKIVPDGRKSARIYKAG
HLDQMMVKGIGQKLAAAGIQDADYYPEGMHHNERQNWRNYLDIERKNISDGLVIELPVKKKARGQGDDSSLALNQMGASQ
RGRVLLAHYGGELAINPDSDTVHYYNGVIWSPVQDKELQRTMAQIFIDEDICYSQNAIKSAVDTMKLSLPVMGNTARHLI
GFSNGVFDTRTGDFREHDKDDWLLIASELPFTPPAEGETLATHAPNFWKWLRRSVAENDRKADRVLAALFMVLANRYDWQ
LFIEVTGPGGSGKSVMAEICTMLAGKANTVSASMKALEDARERALVVGFSLIILPDMTRYAGDGAGIKAITGGDKVAIDP
KHKAPYSTRIPAVVLAVNNSAMSFSDRSGGISRRRVIFNFSEVVPENERDPMLPEKIEGELAVVIRHLLTRFSDQDEARR
LLHEQQKSEEALAIKREGDSLVDFCGYLMSSVMCDGLLVGNAEIIPFSPRRYLYHAYLSYMRAHGFSKPVTLTRFGADMP
GAMAEYGREYMKKRTKEGVRSNVILMDESEDWLPSCAPVKNEGDKN
>Mature_606_residues
MKSAPNLKKQPRGKKHADTEVIIFAGSDAWAHAKQWQEQEGRLAGDDVPPVVLSDEQLKDIGNLKIVPDGRKSARIYKAG
HLDQMMVKGIGQKLAAAGIQDADYYPEGMHHNERQNWRNYLDIERKNISDGLVIELPVKKKARGQGDDSSLALNQMGASQ
RGRVLLAHYGGELAINPDSDTVHYYNGVIWSPVQDKELQRTMAQIFIDEDICYSQNAIKSAVDTMKLSLPVMGNTARHLI
GFSNGVFDTRTGDFREHDKDDWLLIASELPFTPPAEGETLATHAPNFWKWLRRSVAENDRKADRVLAALFMVLANRYDWQ
LFIEVTGPGGSGKSVMAEICTMLAGKANTVSASMKALEDARERALVVGFSLIILPDMTRYAGDGAGIKAITGGDKVAIDP
KHKAPYSTRIPAVVLAVNNSAMSFSDRSGGISRRRVIFNFSEVVPENERDPMLPEKIEGELAVVIRHLLTRFSDQDEARR
LLHEQQKSEEALAIKREGDSLVDFCGYLMSSVMCDGLLVGNAEIIPFSPRRYLYHAYLSYMRAHGFSKPVTLTRFGADMP
GAMAEYGREYMKKRTKEGVRSNVILMDESEDWLPSCAPVKNEGDKN

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67429; Mature: 67429

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAPNLKKQPRGKKHADTEVIIFAGSDAWAHAKQWQEQEGRLAGDDVPPVVLSDEQLKD
CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHH
IGNLKIVPDGRKSARIYKAGHLDQMMVKGIGQKLAAAGIQDADYYPEGMHHNERQNWRNY
CCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LDIERKNISDGLVIELPVKKKARGQGDDSSLALNQMGASQRGRVLLAHYGGELAINPDSD
HHHECCCCCCCEEEEECCCHHCCCCCCCCHHHHHHCCCCCCCCEEEEEECCEEEECCCCC
TVHYYNGVIWSPVQDKELQRTMAQIFIDEDICYSQNAIKSAVDTMKLSLPVMGNTARHLI
EEEEECCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHH
GFSNGVFDTRTGDFREHDKDDWLLIASELPFTPPAEGETLATHAPNFWKWLRRSVAENDR
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCHH
KADRVLAALFMVLANRYDWQLFIEVTGPGGSGKSVMAEICTMLAGKANTVSASMKALEDA
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RERALVVGFSLIILPDMTRYAGDGAGIKAITGGDKVAIDPKHKAPYSTRIPAVVLAVNNS
HHHEEHEEEEEEEECCHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCC
AMSFSDRSGGISRRRVIFNFSEVVPENERDPMLPEKIEGELAVVIRHLLTRFSDQDEARR
CEECCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHH
LLHEQQKSEEALAIKREGDSLVDFCGYLMSSVMCDGLLVGNAEIIPFSPRRYLYHAYLSY
HHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHCCEEECCEEEEECCCHHHHHHHHHHH
MRAHGFSKPVTLTRFGADMPGAMAEYGREYMKKRTKEGVRSNVILMDESEDWLPSCAPVK
HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
NEGDKN
CCCCCC
>Mature Secondary Structure
MKSAPNLKKQPRGKKHADTEVIIFAGSDAWAHAKQWQEQEGRLAGDDVPPVVLSDEQLKD
CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHH
IGNLKIVPDGRKSARIYKAGHLDQMMVKGIGQKLAAAGIQDADYYPEGMHHNERQNWRNY
CCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LDIERKNISDGLVIELPVKKKARGQGDDSSLALNQMGASQRGRVLLAHYGGELAINPDSD
HHHECCCCCCCEEEEECCCHHCCCCCCCCHHHHHHCCCCCCCCEEEEEECCEEEECCCCC
TVHYYNGVIWSPVQDKELQRTMAQIFIDEDICYSQNAIKSAVDTMKLSLPVMGNTARHLI
EEEEECCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHH
GFSNGVFDTRTGDFREHDKDDWLLIASELPFTPPAEGETLATHAPNFWKWLRRSVAENDR
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCHH
KADRVLAALFMVLANRYDWQLFIEVTGPGGSGKSVMAEICTMLAGKANTVSASMKALEDA
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RERALVVGFSLIILPDMTRYAGDGAGIKAITGGDKVAIDPKHKAPYSTRIPAVVLAVNNS
HHHEEHEEEEEEEECCHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCC
AMSFSDRSGGISRRRVIFNFSEVVPENERDPMLPEKIEGELAVVIRHLLTRFSDQDEARR
CEECCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHH
LLHEQQKSEEALAIKREGDSLVDFCGYLMSSVMCDGLLVGNAEIIPFSPRRYLYHAYLSY
HHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHCCEEECCEEEEECCCHHHHHHHHHHH
MRAHGFSKPVTLTRFGADMPGAMAEYGREYMKKRTKEGVRSNVILMDESEDWLPSCAPVK
HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
NEGDKN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA