| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is ygcG [H]
Identifier: 218690899
GI number: 218690899
Start: 3161949
End: 3163097
Strand: Direct
Name: ygcG [H]
Synonym: ECED1_3228
Alternate gene names: 218690899
Gene position: 3161949-3163097 (Clockwise)
Preceding gene: 218690898
Following gene: 218690900
Centisome position: 60.7
GC content: 45.6
Gene sequence:
>1149_bases ATGCGTATTTTTCTCTTACTTCTGATGCTATGCGGTTTTCAGGTATTCGCTGAACGATTGCCTTCAGTGACTGACTTAAC CGGGACATTAACGACAGAAGAACAAAGTGTTTTAAATCAACAATTACAGACTCTCGAGCAGCAAAACCACTTCCAGGTGG CCGTGTTGGTTACGCCGACAACAGGGGGCAAAAACATTAAACTTGCAGCCTCGCAGAGATACGGGGTATATCACTGGAAA CCCGTTGGAGAGAAGCGATATGGCGAAGGTATCTTAATTCTCGTCGTTTGGCCGGAAGGGCTGGCGTCAATGAAGATTGG ACATGGACTGGAACAGATGTTGCCGCCGGAACAAGCTGCGCAAATTGTTCGTTACCATATGCAGCCAGAATTCGAAAAAA ACAATCTCTTTGCTGGATTAACGGACGGAATTGAAAGCATCGCACAGTTTACCCATATCAAAGCGAACCTTAGCCCTTTG GATGCTTTAGCCAATCATCTGTTTGCTAATCCGCAACTTTCGCTGCCATGCCTTGCCTGGACAGTGCTGATGATCGTTGC CATCATTGTCCTCTGGCGATTTACCAGCCGTCCAGGACCTGGCATATGGATGATATCAATGATTACACCTACGGTCTGGT TTTTCTGCTTTCAGGACGATGTCATCATTCGGCGGGTGTCGGTCGTTTGTTTTAGTTTATTTTTCGCAGCAATCTGCTGG CAGCGTCTCGCAGTAGTTTTTAATATGTGCCGCGTATTTCCTATGATGCTGGCCCCAAAAAATAAAAACGCTAAAGTGAA AAAACAAAAGAAGACTCCGCAATTTCGTGAATCAGGACGAAATTCATTGTTTGTCGTGATGCTGATAATTATTGTGGGAT GGTGCCTGGTGTTCGCCAGTAATAAAGATATTGCATTCATCTCAACAATTATTGGGTTAATTGATCATTTTATCGGCCCA ATAACCATTGCTGGCATCGTTCTGCTGATCATTGTGGCCAAATTTACTGGCAATCTTAAGCTGGGGTCAGGAGAAAAAAG CAACAGGAAAACGGGGAATCGTAATGCTCATTCTCGCTCTTCGTCGAGAAATTCTTTCCGCGGTGGTGGCGGTTCTTCAG GAGGCGGCGGTTCATCCGACCGTTGGTGA
Upstream 100 bases:
>100_bases CATCGTCATCCTCTTCATTCGACAATGACAATTTTAGCGGTGGTGGCGGTTCATCTGGTGGCGGTGGCGCTTCCGGGCGC TGGTAACAAAAGGAATTGAT
Downstream 100 bases:
>100_bases TCGTAATGCGCTTAATCTTTATTCTATTCACTTTGTGGTGCCTTCCTGGGCTTGCCCAGCAAATTGCTGTGCCGGAACTG CGCCAACAGGTGACCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQSVLNQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGVYHWK PVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAAQIVRYHMQPEFEKNNLFAGLTDGIESIAQFTHIKANLSPL DALANHLFANPQLSLPCLAWTVLMIVAIIVLWRFTSRPGPGIWMISMITPTVWFFCFQDDVIIRRVSVVCFSLFFAAICW QRLAVVFNMCRVFPMMLAPKNKNAKVKKQKKTPQFRESGRNSLFVVMLIIIVGWCLVFASNKDIAFISTIIGLIDHFIGP ITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSRNSFRGGGGSSGGGGSSDRW
Sequences:
>Translated_382_residues MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQSVLNQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGVYHWK PVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAAQIVRYHMQPEFEKNNLFAGLTDGIESIAQFTHIKANLSPL DALANHLFANPQLSLPCLAWTVLMIVAIIVLWRFTSRPGPGIWMISMITPTVWFFCFQDDVIIRRVSVVCFSLFFAAICW QRLAVVFNMCRVFPMMLAPKNKNAKVKKQKKTPQFRESGRNSLFVVMLIIIVGWCLVFASNKDIAFISTIIGLIDHFIGP ITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSRNSFRGGGGSSGGGGSSDRW >Mature_382_residues MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQSVLNQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGVYHWK PVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAAQIVRYHMQPEFEKNNLFAGLTDGIESIAQFTHIKANLSPL DALANHLFANPQLSLPCLAWTVLMIVAIIVLWRFTSRPGPGIWMISMITPTVWFFCFQDDVIIRRVSVVCFSLFFAAICW QRLAVVFNMCRVFPMMLAPKNKNAKVKKQKKTPQFRESGRNSLFVVMLIIIVGWCLVFASNKDIAFISTIIGLIDHFIGP ITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSRNSFRGGGGSSGGGGSSDRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=153, Percent_Identity=30.0653594771242, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 42455; Mature: 42455
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQSVLNQQLQTLEQQNHFQVAVLVTPT CHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEC TGGKNIKLAASQRYGVYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAA CCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHCCHHHHH QIVRYHMQPEFEKNNLFAGLTDGIESIAQFTHIKANLSPLDALANHLFANPQLSLPCLAW HHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH TVLMIVAIIVLWRFTSRPGPGIWMISMITPTVWFFCFQDDVIIRRVSVVCFSLFFAAICW HHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHH QRLAVVFNMCRVFPMMLAPKNKNAKVKKQKKTPQFRESGRNSLFVVMLIIIVGWCLVFAS HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCC NKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC SSRNSFRGGGGSSGGGGSSDRW CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQSVLNQQLQTLEQQNHFQVAVLVTPT CHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEC TGGKNIKLAASQRYGVYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAA CCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHCCHHHHH QIVRYHMQPEFEKNNLFAGLTDGIESIAQFTHIKANLSPLDALANHLFANPQLSLPCLAW HHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH TVLMIVAIIVLWRFTSRPGPGIWMISMITPTVWFFCFQDDVIIRRVSVVCFSLFFAAICW HHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHH QRLAVVFNMCRVFPMMLAPKNKNAKVKKQKKTPQFRESGRNSLFVVMLIIIVGWCLVFAS HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCC NKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC SSRNSFRGGGGSSGGGGSSDRW CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]