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The map label for this gene is ygbE [H]

Identifier: 218690876

GI number: 218690876

Start: 3138230

End: 3138553

Strand: Reverse

Name: ygbE [H]

Synonym: ECED1_3205

Alternate gene names: 218690876

Gene position: 3138553-3138230 (Counterclockwise)

Preceding gene: 218690877

Following gene: 218690875

Centisome position: 60.25

GC content: 48.77

Gene sequence:

>324_bases
ATGCGTAACAGCCACAACATTACATTAACAAATAACGACGGCCTTACTGAGGTTGAAGACACCACATGGTCGCTGCCAGG
CGCTGTGGTTGGTTTTTTATCGTGGCTGTGCGCGTTGGCAATTCCGATGTTGATTTATGGCTCTAACACGCTGCTCTTTT
TTATCTACACCTGGCCTTTCTTTCTGGCGCTGATGCCCGTCGCAGTGGTGGTGGGGATTGCACTGCATTCATTGATGGAC
GGAAAGCTACGCTACAGTATTGTTTTCACTCTGGCGACGGTTGGCATTATGTTTGGTGCGCTGTTTATGTGGCTACTGGG
TTAA

Upstream 100 bases:

>100_bases
GTACAGCAATTATTAGATCTGTTGAGACAGAACGATATTATCAGATCCTGAGACACCACCGGGTTTTCATGCCCGGTTCG
TCAAAGTAACAGGATCAGAT

Downstream 100 bases:

>100_bases
TTGTTCTTTCCTCTCTATTCTGTTCATAATTCAATCCGTAACTAATAATGAGATTATGTTCTGCACGCCCTGGGTATACG
TAACAATGGACAAATGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRNSHNITLTNNDGLTEVEDTTWSLPGAVVGFLSWLCALAIPMLIYGSNTLLFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLATVGIMFGALFMWLLG

Sequences:

>Translated_107_residues
MRNSHNITLTNNDGLTEVEDTTWSLPGAVVGFLSWLCALAIPMLIYGSNTLLFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLATVGIMFGALFMWLLG
>Mature_107_residues
MRNSHNITLTNNDGLTEVEDTTWSLPGAVVGFLSWLCALAIPMLIYGSNTLLFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLATVGIMFGALFMWLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789106, Length=107, Percent_Identity=92.5233644859813, Blast_Score=198, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022721 [H]

Pfam domain/function: PF12084 DUF3561 [H]

EC number: NA

Molecular weight: Translated: 11833; Mature: 11833

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSHNITLTNNDGLTEVEDTTWSLPGAVVGFLSWLCALAIPMLIYGSNTLLFFIYTWPF
CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLALMPVAVVVGIALHSLMDGKLRYSIVFTLATVGIMFGALFMWLLG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRNSHNITLTNNDGLTEVEDTTWSLPGAVVGFLSWLCALAIPMLIYGSNTLLFFIYTWPF
CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLALMPVAVVVGIALHSLMDGKLRYSIVFTLATVGIMFGALFMWLLG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1316900; 7567469 [H]