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The map label for this gene is ygbL [H]

Identifier: 218690863

GI number: 218690863

Start: 3126771

End: 3127409

Strand: Direct

Name: ygbL [H]

Synonym: ECED1_3191

Alternate gene names: 218690863

Gene position: 3126771-3127409 (Clockwise)

Preceding gene: 218690862

Following gene: 218690864

Centisome position: 60.02

GC content: 53.36

Gene sequence:

>639_bases
ATGAGCGATTTCGCAAAAGTAGAGCAGTCTTTGCGAGAGGAGATGACGCGGATTGCCAGTTCATTCTTTCAGCGCGGCTA
TGCAACCGGTTCGGCTGGCAATCTGTCGCTGCTTTTACCTGACGGGAATTTACTGGCGACACCGACAGGTTCATGCCTGG
GCAATCTCGATCCGCAGCGGCTTTCCAAAGTCGCCGCGGATGGCGAATGGTTAAGTGGTGACAAACCCTCGAAAGAGGTG
CTCTTTCATCTGGCGCTGTATCGCAACAATCCGCGCTGTAAAGCGGTGGTGCATTTGCACAGCACATGGTCGACGGCGCT
TTCCTGCCAGCAAGGGCTGGACAGCAGCAACGTTATTCGTCCGTTCACACCATACGTGGTGATGCGGATGGGAAATATCC
CGCTGGTGCCTTATTACCGACCGGGCGATAAACGCATCGCACAGGATCTGGCGGAACTGGCAGCAGACAATCAGGCTTTT
TTACTGGCAAATCATGGCCCAGTGGTTTGCGGTGAAAGCCTGCAAGAAGCCGCCAACAATATGGAAGAGCTGGAGGAAAC
GGCAAAGCTGATTTTTATTCTCGGTGACCGCCCGATCCGTTATCTGACCGCAGGTGAAATTGCGGAATTAAGGAGTTAA

Upstream 100 bases:

>100_bases
CGTGGGTAAACGCACTGGATAAGCCTGTCTCACTCGCCCTTAAATCTGGCAACTTCGGTGATGAAGCCTTTTTTTCACGA
GCCCAAAGAGAGTTTTTATC

Downstream 100 bases:

>100_bases
TGCAATGCCTCGTTTTGCAGCTAATTTATCCATGATGTTCACCGAAGTGCCTTTTATTGAACGCTTCGCCGCAGCGCGAA
AAGCCGGGTTCGATGCTGTG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEV
LFHLALYRNNPRCKAVVHLHSTWSTALSCQQGLDSSNVIRPFTPYVVMRMGNIPLVPYYRPGDKRIAQDLAELAADNQAF
LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS

Sequences:

>Translated_212_residues
MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEV
LFHLALYRNNPRCKAVVHLHSTWSTALSCQQGLDSSNVIRPFTPYVVMRMGNIPLVPYYRPGDKRIAQDLAELAADNQAF
LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS
>Mature_211_residues
SDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVL
FHLALYRNNPRCKAVVHLHSTWSTALSCQQGLDSSNVIRPFTPYVVMRMGNIPLVPYYRPGDKRIAQDLAELAADNQAFL
LANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=212, Percent_Identity=99.0566037735849, Blast_Score=436, Evalue=1e-124,
Organism=Escherichia coli, GI1789164, Length=199, Percent_Identity=32.1608040201005, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23252; Mature: 23121

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHCCCCHHH
LSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCQQGLDSSNVIR
HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCC
PFTPYVVMRMGNIPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANN
CCCHHHEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHH
MEELEETAKLIFILGDRPIRYLTAGEIAELRS
HHHHHHHHHEEEEECCCCEEEEECCHHHHHCC
>Mature Secondary Structure 
SDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHCCCCHHH
LSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCQQGLDSSNVIR
HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCC
PFTPYVVMRMGNIPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANN
CCCHHHEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHH
MEELEETAKLIFILGDRPIRYLTAGEIAELRS
HHHHHHHHHEEEEECCCCEEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]