| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfgD [H]
Identifier: 218690610
GI number: 218690610
Start: 2868026
End: 2868385
Strand: Direct
Name: yfgD [H]
Synonym: ECED1_2918
Alternate gene names: 218690610
Gene position: 2868026-2868385 (Clockwise)
Preceding gene: 218690609
Following gene: 218690614
Centisome position: 55.05
GC content: 51.67
Gene sequence:
>360_bases ATGACCAAACAGGCAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGG CGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGTGATTTGCTGAAAATGCTGGGGA TGAATAGCGCTCGTGAATTGATGCGCCAAAAAGAGGATCTTTATAAAGAACTGAACCTGGCTGACAGTTCGCTTAGCGAA GAGGTGCTGATTCAGGCGATGGTAGAGAATCCGAAGCTAATGGAACGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGAT TGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAA
Upstream 100 bases:
>100_bases TGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAA TTCGCATTAAAGGAAGAACA
Downstream 100 bases:
>100_bases GATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTACGAATACTATGGAT TAACTTCGCGTAGGTCGGAT
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTKQAKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSE EVLIQAMVENPKLMERPIVVANGKARIGRPPEQVLEIVG
Sequences:
>Translated_119_residues MTKQAKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSE EVLIQAMVENPKLMERPIVVANGKARIGRPPEQVLEIVG >Mature_118_residues TKQAKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEE VLIQAMVENPKLMERPIVVANGKARIGRPPEQVLEIVG
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=119, Percent_Identity=96.6386554621849, Blast_Score=233, Evalue=3e-63, Organism=Escherichia coli, GI1789918, Length=112, Percent_Identity=42.8571428571429, Blast_Score=94, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13431; Mature: 13300
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQAKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSAREL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHH MRQKEDLYKELNLADSSLSEEVLIQAMVENPKLMERPIVVANGKARIGRPPEQVLEIVG HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCCCHHHHHHHCC >Mature Secondary Structure TKQAKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSAREL CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHH MRQKEDLYKELNLADSSLSEEVLIQAMVENPKLMERPIVVANGKARIGRPPEQVLEIVG HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]