Click here to switch to the map view.

The map label for this gene is dedD [H]

Identifier: 218690474

GI number: 218690474

Start: 2717367

End: 2718029

Strand: Reverse

Name: dedD [H]

Synonym: ECED1_2778

Alternate gene names: 218690474

Gene position: 2718029-2717367 (Counterclockwise)

Preceding gene: 218690475

Following gene: 218690473

Centisome position: 52.17

GC content: 57.01

Gene sequence:

>663_bases
GTGGCAAGTAAGTTTCAGAATCGGTTAGTGGGCACGATCGTGCTGGTAGCGCTGGGGGTGATTGTACTTCCAGGGCTGCT
GGACGGGCAGAAAAAACATTATCAGGATGAGTTCGCGGCTATCCCGTTGGTGCCAAAAGCGGGCGATCGCGATGAGCCTG
ATATGATGCCAGCCGCCACCCAGGCGTTGCCGACGCAGCCGCCGGAAGGCGCAGCGGAGGAGGTACGGGCAGGTGATGCC
GCAGCACCGTCGCTCGATCCGGCCACTATTGCAGCCAATAACACCGAGTTTGAACCGGAACCTGCACCGGTCGCCCCACC
GAAGCCGAAACCGGTGGAGCCGCTTAAGCCAAAGGTTGAAGCACCACCTGCGCCGAAGCCAGAACCGAAGCCGGTCGTGG
AAGAAAAAGCAGCGCCAACGGGTAAAGCTTATGTTGTGCAACTGGGCGCGCTGAAAAATGCCGATAAAGTGAATGAGATT
GTCGGTAAGCTGCGCGGTGCCGGTTATCGGGTTTATACGTCGCCATCCACGCCAGTGCAGGGTAAAATTACCCGTATTCT
GGTTGGGCCGGATGCTTCCAAAGAGAAGCTGAAAGGATCGCTGGGTGAGCTCAAGCAGCTTTCTGGCTTAAGTGGCGTGG
TAATGGGCTATACACCGAATTAA

Upstream 100 bases:

>100_bases
GCCGCAATGGCGGACGCTAAAGCGGAAGACACCGTGCTGGTGTGTGGTTCGTTCCACACGGTCGCACATGTCATGGAAGT
GATTGACGCGAGGAGAAGCG

Downstream 100 bases:

>100_bases
TACGGTCTTGCCTGATGCGACGCTGGCGCATCTTATCAGGCCTGTGCAGGGGTAGAACAGTAGGTCGGATAAGGCGTTCA
CGCTGCATCCGACAGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDA
AAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPLKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKEKLKGSLGELKQLSGLSGVVMGYTPN

Sequences:

>Translated_220_residues
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDA
AAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPLKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKEKLKGSLGELKQLSGLSGVVMGYTPN
>Mature_219_residues
ASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAA
APSLDPATIAANNTEFEPEPAPVAPPKPKPVEPLKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIV
GKLRGAGYRVYTSPSTPVQGKITRILVGPDASKEKLKGSLGELKQLSGLSGVVMGYTPN

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=220, Percent_Identity=99.0909090909091, Blast_Score=423, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 22969; Mature: 22838

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAAT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
QALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPLKPKVE
HHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQ
CCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
GKITRILVGPDASKEKLKGSLGELKQLSGLSGVVMGYTPN
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
>Mature Secondary Structure 
ASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAAT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
QALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPLKPKVE
HHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQ
CCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
GKITRILVGPDASKEKLKGSLGELKQLSGLSGVVMGYTPN
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]