Click here to switch to the map view.

The map label for this gene is ubiX [H]

Identifier: 218690471

GI number: 218690471

Start: 2714311

End: 2714880

Strand: Reverse

Name: ubiX [H]

Synonym: ECED1_2775

Alternate gene names: 218690471

Gene position: 2714880-2714311 (Counterclockwise)

Preceding gene: 218690472

Following gene: 218690470

Centisome position: 52.11

GC content: 52.81

Gene sequence:

>570_bases
ATGAAACGACTCATTGTAGGCATCAGCGGTGCCAGCGGCGCGATTTATGGCGTGCGTTTATTACAGGTTCTGCGCGATGT
CACAGATATCGAAACGCATCTGGTAATGAGCCAGGCGGCGCGCCAGACCTTATCCCTCGAAACGGATTTTTCCCTGCGCG
AAGTGCAGGCGTTAGCTGATGTGACACACGATGCGCGCGATATTGCTGCCAGCATTTCTTCCGGTTCTTTCCAGACGTTG
GGGATGGTGATTTTACCCTGTTCAATCAAAACCCTGTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGC
GGCAGATGTGGTGCTGAAAGAACGTCGCCCGTTGGTGCTCTGCGTGCGTGAAACGCCACTGCACTTAGGCCATCTGCGTT
TAATGACTCAGGCGGCAGAAATCGGTGCGGTGATTATGCCTCCCGTTCCGGCGTTTTATCATCGCCCACAATCCCTTGAT
GATGTGATAAATCAGACGGTTAATCGTGTTCTTGACCAGTTTGCGGTAACCCTTCCTGAAGATCTCTTTGCCCGCTGGCA
GGGCGCATAA

Upstream 100 bases:

>100_bases
GGATGATGCCTTCACTCAGGGTGCCGGTCTGGCACCCTGACTTGCAACTCCCGCCGAAATCCTGCAAAGTCTGCCTGCAA
GTCTGACAGGGCAACTATTT

Downstream 100 bases:

>100_bases
CTCCGCTGTTGCCCTGTTTCAGGGCAATTTTGCAACCGCGATCAAATCCTCGACATTTTGTTTCTGCCATTCAATCGAAA
CGCTGCGATTCAACCGCTAT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVTHDARDIAASISSGSFQTL
GMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAVTLPEDLFARWQGA

Sequences:

>Translated_189_residues
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVTHDARDIAASISSGSFQTL
GMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAVTLPEDLFARWQGA
>Mature_189_residues
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVTHDARDIAASISSGSFQTL
GMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAVTLPEDLFARWQGA

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=99.4708994708995, Blast_Score=382, Evalue=1e-108,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=49.7326203208556, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20681; Mature: 20681

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAVTLPE
EEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
DLFARWQGA
HHHHHCCCC
>Mature Secondary Structure
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAVTLPE
EEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
DLFARWQGA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]