| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfcF [H]
Identifier: 218690461
GI number: 218690461
Start: 2706096
End: 2706740
Strand: Reverse
Name: yfcF [H]
Synonym: ECED1_2765
Alternate gene names: 218690461
Gene position: 2706740-2706096 (Counterclockwise)
Preceding gene: 218690465
Following gene: 218690460
Centisome position: 51.96
GC content: 51.63
Gene sequence:
>645_bases ATGAGTAAAACCGCTATCACGCTTTGGTCAGATGCCCATTTTTTCTCCCCTTATGTGTTATCCGCCTGGGTGGCGTTGCA GGAGAAAGGCCTGTCGTTTCATATCAAGACCATCGACCTCGACAGCGGTGAACATTTGCAGCCGGCGTGGCAAGGTTACG GTCAGACACGCCGTGTGCCGTTATTACAAATCGATGATTTTGAGTTGAGTGAATCTTCTGCCATTGCGGAGTATCTGGAA GATCGATTTGCGCCACCGACCTGGGAACGTATTTATCCGCTTGATTTAGAAAATCGTGCGCGTGCACGACAGATTCAGGC TTGGTTGCGCAGCGATCTGATGCCCATTCGCGAAGAACGCCCGACGGATGTTGTCTTTGCGGGGGCGAAAAAAGCGCCAC TAACGGCCGAGGGAAAAGCCAGTGCAGAGAAATTGTTCGCGATGGCAGAGCATTTGTTAGCACTGGGTCAGCCGAATTTA TTTGGTGAATGGTGCATTGCTGATACTGATCTGGCGCTAATGATTAACCGCCTGGTACTACATGGCGATGAGGTGCCGGA ACGCCTGGTGGATTATGCGACATTCCAGTGGCAGCGAGCGTCTGTCCAGCGTTTTATTGCACTTTCGGCGAAGCAATCTG GCTGA
Upstream 100 bases:
>100_bases AGTATAGAAAGCGCGGCGACTTGCGTGAGTATTCGTCACGTGACAGTGACAAAAAGGCTCTATAGTTTGATAGCAAGCCC CCTTTATTGCCGAGGACATA
Downstream 100 bases:
>100_bases TAGCAACGACAGAATCCAGTATCATAGCTTACGTTTTTTCGACGAGGAGTGAGTGATGAAACTGATGTTTGCATCGGACA TTCATGGGTCGTTACCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSKTAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPAWQGYGQTRRVPLLQIDDFELSESSAIAEYLE DRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNL FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG
Sequences:
>Translated_214_residues MSKTAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPAWQGYGQTRRVPLLQIDDFELSESSAIAEYLE DRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNL FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG >Mature_213_residues SKTAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPAWQGYGQTRRVPLLQIDDFELSESSAIAEYLED RFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLF GEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788639, Length=214, Percent_Identity=98.5981308411215, Blast_Score=433, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24272; Mature: 24141
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPAWQGYGQTRRVP CCCCEEEEECCCCHHCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCE LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER EEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLFGEWCIADTDLALMINRLVL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKTAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPAWQGYGQTRRVP CCCEEEEECCCCHHCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCE LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER EEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLFGEWCIADTDLALMINRLVL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]