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The map label for this gene is yfaZ [H]

Identifier: 218690413

GI number: 218690413

Start: 2653866

End: 2654408

Strand: Reverse

Name: yfaZ [H]

Synonym: ECED1_2716

Alternate gene names: 218690413

Gene position: 2654408-2653866 (Counterclockwise)

Preceding gene: 218690415

Following gene: 218690412

Centisome position: 50.95

GC content: 52.49

Gene sequence:

>543_bases
ATGAAAAAAATTGCGCTAGCAGGTCTGGCCGGAATGCTGTTGGTTTCTGCATCGGTCAATGCAATGAGCATCAGCGGCCA
GGCGGGTAAAGAATACACCAATATTGGTGTCGGTTTTGGGACTGAATCGACGGGCCTGGCGTTAAGCGGTAACTGGACAC
ATAACGACGACGACGGTGATGCCGCGGGCGTGGGGCTGGGGTTGAATCTGCCTCTCGGGCCATTAATGGCGACCGTTGGC
GGAAAAGGCGTTTACACCAACCCGAACGATGGTGATGAAGGTTATGCAGCGGCAGTTGGCGGTGGTTTGCAGTGGCAAAT
TGGTGACAGCTTCCGTTTGTTTGGTGAGTATTACTACTCTCCGGATTCGCTCTCCAGCGGAATTAAAAGTTATGAAGAAG
CGAATGCTGGCGCGCGTTACACCATTATGCGTCCAGTCAGCATTGAGGCTGGCTACCGTTACCTGAACCTGGCAGGTAAA
AATGGCAATCGTGATAACGCCATTGCTGATGGCCCGTATGTTGGGGTAAATGCCAGCTTCTGA

Upstream 100 bases:

>100_bases
GTGACTAGATCCCTTTTTTCGCTCATTGAATCCTCTGCGCCAGGCAGTACAATCCCGCAGCTTTGGGAATTTTAATTAAT
TGCTTGTGGGAAAGGGGATA

Downstream 100 bases:

>100_bases
CGCCTTCCGGCGCGGCGTTCTGTCGCGCCATTCAGTTTCTTACTACGCCCTGTCTCCCTTTGCGTTATAGTGATTCGATA
ACAAAAGCAGGAGATAACCA

Product: putative outer membrane porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDAAGVGLGLNLPLGPLMATVG
GKGVYTNPNDGDEGYAAAVGGGLQWQIGDSFRLFGEYYYSPDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLAGK
NGNRDNAIADGPYVGVNASF

Sequences:

>Translated_180_residues
MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDAAGVGLGLNLPLGPLMATVG
GKGVYTNPNDGDEGYAAAVGGGLQWQIGDSFRLFGEYYYSPDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLAGK
NGNRDNAIADGPYVGVNASF
>Mature_180_residues
MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDAAGVGLGLNLPLGPLMATVG
GKGVYTNPNDGDEGYAAAVGGGLQWQIGDSFRLFGEYYYSPDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLAGK
NGNRDNAIADGPYVGVNASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082072, Length=180, Percent_Identity=95, Blast_Score=312, Evalue=9e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR009998 [H]

Pfam domain/function: PF07437 YfaZ [H]

EC number: NA

Molecular weight: Translated: 18518; Mature: 18518

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD
CCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCC
AAGVGLGLNLPLGPLMATVGGKGVYTNPNDGDEGYAAAVGGGLQWQIGDSFRLFGEYYYS
EEEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEC
PDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLAGKNGNRDNAIADGPYVGVNASF
CHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD
CCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCC
AAGVGLGLNLPLGPLMATVGGKGVYTNPNDGDEGYAAAVGGGLQWQIGDSFRLFGEYYYS
EEEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEC
PDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLAGKNGNRDNAIADGPYVGVNASF
CHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]