Click here to switch to the map view.

The map label for this gene is 218690254

Identifier: 218690254

GI number: 218690254

Start: 2486126

End: 2486383

Strand: Reverse

Name: 218690254

Synonym: ECED1_2549

Alternate gene names: NA

Gene position: 2486383-2486126 (Counterclockwise)

Preceding gene: 218690276

Following gene: 218690253

Centisome position: 47.73

GC content: 47.29

Gene sequence:

>258_bases
GTGTGTAATGGGTGTGTGATTAATACTAGGGAGACCGCAATGAACAAAATTGCCCAGCAGCGAAAAAAAATCGGAGTTTC
GCAAGCTGTACTGGCTTCGGCAATTGGTTGGGGGCAATCCCGCATCGCCAACTATGAGCTGAATATCCGTACTCCTAGAC
TTAACGATTGCCGAAAGATCGTAGAAGGCCTCAGGAAGTTAGGGTGCCAATGTTCTTTGGATGATGTTTTCCCTCCATCC
AGTAACAAAGCCGCCTAA

Upstream 100 bases:

>100_bases
TTTCCCCGATAATTTCATGCATCGTTTTCATCCTTTAAATGTAACACGCAACGTGATTGAACTCTGTACACGAATTGAGG
TTGACTGTTAATCACAAATT

Downstream 100 bases:

>100_bases
GCAGTACCCGCTCTTTGTAACAACGGACATTCGTCCTACGTCGCTGAAAAGCGAGTCCCAAGATATCTGACCAACTAAGG
CCATATGCGTTTCCACGCAT

Product: putative repressor protein from phage

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Phage Repressor; Cro Protein Phage

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MCNGCVINTRETAMNKIAQQRKKIGVSQAVLASAIGWGQSRIANYELNIRTPRLNDCRKIVEGLRKLGCQCSLDDVFPPS
SNKAA

Sequences:

>Translated_85_residues
MCNGCVINTRETAMNKIAQQRKKIGVSQAVLASAIGWGQSRIANYELNIRTPRLNDCRKIVEGLRKLGCQCSLDDVFPPS
SNKAA
>Mature_85_residues
MCNGCVINTRETAMNKIAQQRKKIGVSQAVLASAIGWGQSRIANYELNIRTPRLNDCRKIVEGLRKLGCQCSLDDVFPPS
SNKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9322; Mature: 9322

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNGCVINTRETAMNKIAQQRKKIGVSQAVLASAIGWGQSRIANYELNIRTPRLNDCRKI
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCEEEEEECCCCHHHHHH
VEGLRKLGCQCSLDDVFPPSSNKAA
HHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCNGCVINTRETAMNKIAQQRKKIGVSQAVLASAIGWGQSRIANYELNIRTPRLNDCRKI
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCEEEEEECCCCHHHHHH
VEGLRKLGCQCSLDDVFPPSSNKAA
HHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA