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The map label for this gene is ybcQ [C]

Identifier: 218690241

GI number: 218690241

Start: 2479121

End: 2479639

Strand: Reverse

Name: ybcQ [C]

Synonym: ECED1_2536

Alternate gene names: 218690241

Gene position: 2479639-2479121 (Counterclockwise)

Preceding gene: 218690242

Following gene: 218690240

Centisome position: 47.6

GC content: 45.47

Gene sequence:

>519_bases
ATGGGCATAAGAGAACTAAACCTCACCAAAGAACAGCACGATTGGCTGAATGGCTGGCTTGAACTGTGGGGCGCATGGGG
TTATTCAGGTCGTCTGGAAAAGCGCATGAGCAGCGTAATAGCGAAGTTCATGGAGAGCGTAGAGCCGGGAAGAGTTATGA
CAAGACCAATGTGTAATGATGATGATGGAATGTTGATTTCTCAGGTCGTCGATTCCGTCATGTACATTGACAAGAAAGCC
TTTGGCATCCTCCTCAGCTACTACGCTCATGGTTCATCTAAGAGAGCAATTGCATCCTACTATCACGCGACTGCAAAGCC
ACGCAAGATGTGTGGACGCGGTGGCGAGGGATGGAGAAAACCTTCACTGGCAACCTGTAGAAACGAAATTGACGATATCC
TGAAAGCGTCATTATTTGTTTTGTACCAACCAATGCAAAATGCTTTCAAAATGCGTAAACGTGTTGAGAAAGTTAAGCAT
GTTGCTGTTAAAAGCCTTGACATGCAATTAGCCATTTAG

Upstream 100 bases:

>100_bases
GCAGAGTACCAACAGAAACTCAAAGACCTGCGAAACAGCAGAAGTGAGGCCGCATGACGCTCTCAGTAAAAACCATTCCA
GATAACAAGGGAGAAGTCGC

Downstream 100 bases:

>100_bases
CCATAATTAGAGGGTAAGCTGCCGTTAGTGACTCTTAAGTTGCAACGGTGGCTTTTTTTATTTGGGTCAGTCGTATAAAG
GTCATTACGGAAGGCTGTTA

Product: putative phage antitermination protein Q

Products: NA

Alternate protein names: Antitermination Protein; Late Gene Antiterminator Protein; Phage Antiterminator Q Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MGIRELNLTKEQHDWLNGWLELWGAWGYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCNDDDGMLISQVVDSVMYIDKKA
FGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRKPSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKH
VAVKSLDMQLAI

Sequences:

>Translated_172_residues
MGIRELNLTKEQHDWLNGWLELWGAWGYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCNDDDGMLISQVVDSVMYIDKKA
FGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRKPSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKH
VAVKSLDMQLAI
>Mature_171_residues
GIRELNLTKEQHDWLNGWLELWGAWGYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCNDDDGMLISQVVDSVMYIDKKAF
GILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRKPSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKHV
AVKSLDMQLAI

Specific function: Positively Regulate Expression Of Some Phage Genes. Bacterial Host RNA Polymerase Modified By Antitermination Proteins Transcribes Through Termination Sites That Otherwise Prevent Expression Of The Regulated Genes (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19681; Mature: 19550

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRELNLTKEQHDWLNGWLELWGAWGYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCND
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
DDGMLISQVVDSVMYIDKKAFGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCC
PSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKHVAVKSLDMQLAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIRELNLTKEQHDWLNGWLELWGAWGYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCND
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
DDGMLISQVVDSVMYIDKKAFGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCC
PSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKHVAVKSLDMQLAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA