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The map label for this gene is yehC [H]

Identifier: 218690175

GI number: 218690175

Start: 2410144

End: 2410818

Strand: Reverse

Name: yehC [H]

Synonym: ECED1_2466

Alternate gene names: 218690175

Gene position: 2410818-2410144 (Counterclockwise)

Preceding gene: 218690176

Following gene: 218690174

Centisome position: 46.28

GC content: 38.96

Gene sequence:

>675_bases
ATGAAAGGATTATTAGCTTTACTCATTTCTTCTATGGTCCTTCCTGCACATGCCGGTATTGTTATCTACGGGACGCGTAT
TATTTACCCGGCAGAGCACAAAGAAGTGATGGTGCAGTTGATGAACCAGGGAAACCGTTCTTCGCTGATGCAGGCGTGGA
TTGATGATGGCGATACGTCATTACCACCAGAAAAAATTCAGGTTCCTTTCATGTTAACGCCACCAGTGGCAAAAATAGGG
GCAAATTCCGGGCAGCAAGTAAAAATTAAAATTATGCCGAATAAACTACCTACTAATAAAGAGAGTATTTTTTATCTGAA
TGTTCTGGATATTCCACCAAATAGTCCAGAACAAGAAGGTAAGAATGCACTGAAGTTTGCGATGCAAAACAGAATTAAGT
TGTTTTACCGGCCAGCGGGTATTGCTCCGGTAAATAAAGCGACCTTTAAAAAGTTACTGGTAAATCGCAGTGGCAATGGA
TTGGTGATAAAAAATGCCTCAGCTAATTGGGTGACGATTTCGGATGTCAAAGCTAATAATGTCAAAGTCAATTATGAAAC
TATTATGATTGCCCCCTTAGAAAGTCAGAGTGTTAATGTCAAAAGTAATAATGCAAATAACTGGCATCTGACCATTATCG
ATGACCATGGCAATTATATTAGTGACAAAATTTAA

Upstream 100 bases:

>100_bases
TGCGTGTGGCGCAGGATTAATAAATAAAATTGCAAGATTCTTCAGGTAATTAACATGGCCGCTATCTCCATGGCGGCCTT
TTAATTTAAGAGGCATTAAG

Downstream 100 bases:

>100_bases
TTGCAGGAGCTGCCTATGTTGAGAATGACCCCACTTGCATCAGCAATCGTAGCGTTATTGATCGGCATTGAAGCTTATGC
AGCTGAAGAAACCTTTGATA

Product: putative membrane-associated pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG
ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
LVIKNASANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI

Sequences:

>Translated_224_residues
MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG
ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
LVIKNASANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI
>Mature_224_residues
MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG
ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
LVIKNASANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1788428, Length=224, Percent_Identity=97.7678571428571, Blast_Score=442, Evalue=1e-126,
Organism=Escherichia coli, GI1786333, Length=234, Percent_Identity=35.4700854700855, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1789532, Length=217, Percent_Identity=31.7972350230415, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790771, Length=220, Percent_Identity=29.0909090909091, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786936, Length=222, Percent_Identity=29.7297297297297, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788677, Length=201, Percent_Identity=34.8258706467662, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786743, Length=221, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI87082203, Length=223, Percent_Identity=27.8026905829596, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787171, Length=227, Percent_Identity=25.5506607929515, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081806, Length=226, Percent_Identity=23.4513274336283, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 24758; Mature: 24758

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLMQAWIDDGDTS
CCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
LPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEG
CCHHHEEEEEEECCCHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHH
KNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNASANWVTISDVKANN
HHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCC
VKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI
EEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLMQAWIDDGDTS
CCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
LPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEG
CCHHHEEEEEEECCCHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHH
KNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNASANWVTISDVKANN
HHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCC
VKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI
EEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]