| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690156
Identifier: 218690156
GI number: 218690156
Start: 2393430
End: 2393960
Strand: Reverse
Name: 218690156
Synonym: ECED1_2445
Alternate gene names: NA
Gene position: 2393960-2393430 (Counterclockwise)
Preceding gene: 218690157
Following gene: 218690155
Centisome position: 45.95
GC content: 55.37
Gene sequence:
>531_bases ATGAGTGATTCGCGACTGCTGCCGACCGGCTCATCACCGCTTGAAGTTGCCGCCGCAAAAGCCTGTGCGGAAATTGAAAA AACGCCGGTCAGTATTCGTGATCTGTGGAACCCGAATACCTGTCCGGCAAATCTGCTGCCGTGGCTGGCGTGGGCGTTTT CGGTCGACAGATGGGATGAAAAGTGGCCGGAAGCGACAAAACGCGCCGTTATCCGCGATGCCTATTTCATCCACTGTCAT AAGGGCACGATAGGTGCAATCCGGCGTGTGGTGGAGCCGCTCGGCTATCTCATCAACGTGACGGAGTGGTGGGAAAACAG TGACCCGCCCGGCACCTTCCGGCTTGATATTGGTGTACTGGAAAGCGGTATCACAGAGGCAATGTATCAGGAAATGGAAC GGCTGATTGCTGATGCCAAACCTGCAAGCCGTCACCTTATTGGCCTGAACATTACCCGGGACATTCCCGGCTACCTGTTC GCCGGTGGTGTGGCTTACGACGGCGATGTAATTACGGTTTACCCCGGATAA
Upstream 100 bases:
>100_bases GTGCAGCGTGTCGAACTGGCTGCACCACTGGTCGATATCGTGCTCAACAGTACGCAGGCGTCTTTCTGTACCGAATACCA CGTCGTGACCGGAGGCTCGG
Downstream 100 bases:
>100_bases GTGAGGAATAATGAGCACAAAATTCAAAACCGTTATCACCACTGCCGGTGCAGCAAAGCTGGCAGCGGCAACCGCACCGG GAGGGCGGAAGGTCAACATT
Product: tail protein I (GpI)
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Pyocin R2_PP Tail Formation Protein GpI; Tail Protein I Prophage; Tail Formation-Like Protein; Phage P2 Baseplate Assembly GpI-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Prophage Tail Protein; Bacteriophage Tail Formation Protein I; Phage-Related Tail Protein I; Pyocin R2_PP Tail Formation Protein; Bacteriophage Tail Protein I
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRDLWNPNTCPANLLPWLAWAFSVDRWDEKWPEATKRAVIRDAYFIHCH KGTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLF AGGVAYDGDVITVYPG
Sequences:
>Translated_176_residues MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRDLWNPNTCPANLLPWLAWAFSVDRWDEKWPEATKRAVIRDAYFIHCH KGTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLF AGGVAYDGDVITVYPG >Mature_175_residues SDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRDLWNPNTCPANLLPWLAWAFSVDRWDEKWPEATKRAVIRDAYFIHCHK GTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLFA GGVAYDGDVITVYPG
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19569; Mature: 19438
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRDLWNPNTCPANLLPWLAWAFSVDRWDE CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH KWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVL HCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHEEHHHHCCCCCCCCEEEEEHHHH ESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLFAGGVAYDGDVITVYPG HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCEEECCCEEEEECC >Mature Secondary Structure SDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRDLWNPNTCPANLLPWLAWAFSVDRWDE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH KWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVL HCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHEEHHHHCCCCCCCCEEEEEHHHH ESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLFAGGVAYDGDVITVYPG HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA