Click here to switch to the map view.

The map label for this gene is wcaC [H]

Identifier: 218690115

GI number: 218690115

Start: 2339806

End: 2341023

Strand: Reverse

Name: wcaC [H]

Synonym: ECED1_2403

Alternate gene names: 218690115

Gene position: 2341023-2339806 (Counterclockwise)

Preceding gene: 218690116

Following gene: 218690114

Centisome position: 44.94

GC content: 54.35

Gene sequence:

>1218_bases
ATGAATATTTTGCAATTTAATGTGCGACTGGCGGAAGGCGGGGCAGCAGGTGTGGCGTTAGATCTCCACCAGCGTGCGCT
GCAACAGGGGCTGGCGTCACATTTTGTCTACGGTTACGGCAAAGGCGGCAAAGAGAGCGTCAGCCATCAAAACTATCCGC
AGGTCATCAAACATACGCCGCGGATGACCGCGATGGCGAACATTGCCCTGTTTCGTCTGTTTAATCGCGATCTGTTCGGC
AATTTCAATGAGTTATATCGCACCATTACTCGCATACCGGGTCCGGTGGTCCTGCATTTTCATGTGCTGCACAGCTACTG
GTTGAATCTTAACAGCGTGGTGCGCTTTTGCGAAAAGGTGAAAAACCATAAACCGGACGCCACTCTGGTCTGGACGCTGC
ACGATCACTGGAGCGTTACCGGACGCTGCGCCTTTACCGACGGTTGCGAAGGCTGGAAAACGGGCTGCCAGAAATGCCCG
ACCTTAAATAACTATCCGCCGGTGAAGATTGATCGGGCGCACCAGCTGGTGGCGGGCAAACGCCAGTTATTCCGCGAGAT
GCTGGCACTGGGCTGTCAGTTTATTTCCCCCAGCCAGCATGTGGCTGACGCTTTCAATAGTCTGTACGGTCCAGGGCGTT
GCCGGATTATCAATAATGGTATTGATGTGGCAACAGAAGCGATTCTGGCGGACTTGCCTCCGGTACGCGAAACCCAGGGC
AAGCCGAAAATCGCGGTGGTGGCGCATGACCTGCGTTACGACGGCAAGACTAACCAGCAACTGGTGCGTGAGATGATGGC
GCTGGGCGATAAAATCGAACTGCATACCTTTGGTAAGTTCTCGCCGTTCACCGCTGGCAACGTGGTTAATCACGGCTTTG
AAACTGACAAGCGCAAGTTGATGAGCGCGCTCAATCAGATGGATGCGCTGGTGTTCAGTTCTCGCGTCGATAACTACCCG
CTGATTTTGTGTGAGGCGCTATCGATTGGCGTGCCGGTGATTGCCACCCATAGCGACGCGGCGCGGGAAGTGCTGCAAAA
ATCCGGCGGTAAAACCGTCAGCGAAGAAGACGTGCTGCAACTGGTGCAGTTAAGCAAACCGGAAATCGCGCAGGCGATAT
TTGGTACCACGCTGGCTGAGTTCAGCCAACGCAGCCGCGCCGCCTACAGTGGACAACAGATGCTGGAGGAGTATGTCAAC
TTCTATCAGAATCTGTAG

Upstream 100 bases:

>100_bases
TTGGTAACAACGTCACCGTGGGTGCGGGCAGCGTGGTGCTCGACTCTGTCCCGGACAACGCGCTGGTGGTGGGAGAAAAA
GCGCGAGTGAAGGTAATTAA

Downstream 100 bases:

>100_bases
CTACCTGCTGCTGCCGCTGATCTACCTGCTGGTTAACGTCAAAATCGCCCAGCTTGGCGAAAGTTTCCCCATCACCATCG
TCACTTTTTTACCTGTCTTA

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG
NFNELYRTITRIPGPVVLHFHVLHSYWLNLNSVVRFCEKVKNHKPDATLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDVATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP
LILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVN
FYQNL

Sequences:

>Translated_405_residues
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG
NFNELYRTITRIPGPVVLHFHVLHSYWLNLNSVVRFCEKVKNHKPDATLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDVATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP
LILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVN
FYQNL
>Mature_405_residues
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG
NFNELYRTITRIPGPVVLHFHVLHSYWLNLNSVVRFCEKVKNHKPDATLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDVATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP
LILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVN
FYQNL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788370, Length=405, Percent_Identity=98.5185185185185, Blast_Score=839, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45210; Mature: 45210

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHHCCC
RMTAMANIALFRLFNRDLFGNFNELYRTITRIPGPVVLHFHVLHSYWLNLNSVVRFCEKV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
KNHKPDATLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
HCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEECHHHHHHHHH
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDVATEAILADLPPVRETQG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHCCC
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
CCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHH
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQ
HHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHH
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHHCCC
RMTAMANIALFRLFNRDLFGNFNELYRTITRIPGPVVLHFHVLHSYWLNLNSVVRFCEKV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
KNHKPDATLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
HCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEECHHHHHHHHH
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDVATEAILADLPPVRETQG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHCCC
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
CCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHH
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQ
HHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHH
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]