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The map label for this gene is amsD [H]

Identifier: 218690092

GI number: 218690092

Start: 2311811

End: 2312857

Strand: Reverse

Name: amsD [H]

Synonym: ECED1_2380

Alternate gene names: 218690092

Gene position: 2312857-2311811 (Counterclockwise)

Preceding gene: 218690093

Following gene: 218690091

Centisome position: 44.4

GC content: 34.19

Gene sequence:

>1047_bases
ATGCCTATGAAAAAAGTATATATTTTTATTGATGATATATCCCGTTCCGGTGGCACAGAACGAGTTGCGACATTTCTCTC
TAATCAAATGTTTTTATCCGGATTTTCAGTCACACTAATATCATTAGCATTAGAAGGAGGGAATACATACTATCCGCTGC
AACCCGGAGTCAAGTTAGAGGTTTTAAGTGAATCAACATTATACGAATTGTTTCTTTTTTTAAGAAAAAATTCATGTGAT
GTGTTGATTTCTGTTTCCATGGGTAGTTTATCGTTTAAGCTTGCATGTTTACATTTTCTATTACGATTAAAATCTCGTCT
TATTTTAAGTGAGCATGTGGCTTTTGAATCCTCATCAAAGTTCATTCGTTCTCTAAAATGGTTAAGCTATCAATTCGCTG
ATGATCTTGTATTATTGACAAAGCATGATTATAAATTGCTTAAGTCAAATGTTAGGGCTCATACTCACGTTATCAATAAT
GCTAGTGGTTTCGAACAATTATCTGAATCTGTTCTTATTCAAAAGCAAAAGATAGTATTAGCAGTGGGACGTTTAACTTA
TCAGAAGGGGTTTGATAGGTTAATTCGTATTTGGGCTTCCATATCGGACAATCACGGTTGGGTTTTACGGATCGTAGGGG
ATGGAGAATTGCGTTCAGAACTACAAAAAATGATTGTTGACCTGAATGTTACACATAATGTCCAACTTATACCAGCAACA
AAATGTATAGAACAAGAATATACTAATGCAGCTATATTAGCTATGACTTCTCGCTATGAAGGACTACCATTGGTTCTTAT
AGAGGCTAAATCTTTTGGATTAGCAGCAGTCGCTTTTGATTGTAAAACAGGTCCTGCTGAAATTATTCATCACAAAAAAG
ATGGGTTCTTGATTACTGAAGATAATGAACCTGAATTTTCATATCGTCTTCAGTCTTTAATGATCGATGATGTTTATCGA
AACAAAATACAAAGTATGGCCTTAAGAAATGCTAATGATTATTCTGTTGAAAAAATAAGTCGGCAGTGGTTGGAGTTAAT
ATCATGA

Upstream 100 bases:

>100_bases
ACTTAGGGAGCATTTTGTATATTGCTTTTGTTGTCAAAAAATTACTATATAAATAATAATTTACATAATTTTATTTTTAT
ATAATCTATTTATTGTCTAG

Downstream 100 bases:

>100_bases
GTAGTTATGAAACAGTATCTATAATCATGCCTACGTTTAATGCTGCATCTTATATTTCGTATAGCATCATTTCTGTAATT
GAACAATCATATAATGATTG

Product: putative glycosyltransferase WbdM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPMKKVYIFIDDISRSGGTERVATFLSNQMFLSGFSVTLISLALEGGNTYYPLQPGVKLEVLSESTLYELFLFLRKNSCD
VLISVSMGSLSFKLACLHFLLRLKSRLILSEHVAFESSSKFIRSLKWLSYQFADDLVLLTKHDYKLLKSNVRAHTHVINN
ASGFEQLSESVLIQKQKIVLAVGRLTYQKGFDRLIRIWASISDNHGWVLRIVGDGELRSELQKMIVDLNVTHNVQLIPAT
KCIEQEYTNAAILAMTSRYEGLPLVLIEAKSFGLAAVAFDCKTGPAEIIHHKKDGFLITEDNEPEFSYRLQSLMIDDVYR
NKIQSMALRNANDYSVEKISRQWLELIS

Sequences:

>Translated_348_residues
MPMKKVYIFIDDISRSGGTERVATFLSNQMFLSGFSVTLISLALEGGNTYYPLQPGVKLEVLSESTLYELFLFLRKNSCD
VLISVSMGSLSFKLACLHFLLRLKSRLILSEHVAFESSSKFIRSLKWLSYQFADDLVLLTKHDYKLLKSNVRAHTHVINN
ASGFEQLSESVLIQKQKIVLAVGRLTYQKGFDRLIRIWASISDNHGWVLRIVGDGELRSELQKMIVDLNVTHNVQLIPAT
KCIEQEYTNAAILAMTSRYEGLPLVLIEAKSFGLAAVAFDCKTGPAEIIHHKKDGFLITEDNEPEFSYRLQSLMIDDVYR
NKIQSMALRNANDYSVEKISRQWLELIS
>Mature_347_residues
PMKKVYIFIDDISRSGGTERVATFLSNQMFLSGFSVTLISLALEGGNTYYPLQPGVKLEVLSESTLYELFLFLRKNSCDV
LISVSMGSLSFKLACLHFLLRLKSRLILSEHVAFESSSKFIRSLKWLSYQFADDLVLLTKHDYKLLKSNVRAHTHVINNA
SGFEQLSESVLIQKQKIVLAVGRLTYQKGFDRLIRIWASISDNHGWVLRIVGDGELRSELQKMIVDLNVTHNVQLIPATK
CIEQEYTNAAILAMTSRYEGLPLVLIEAKSFGLAAVAFDCKTGPAEIIHHKKDGFLITEDNEPEFSYRLQSLMIDDVYRN
KIQSMALRNANDYSVEKISRQWLELIS

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May be involved in the formation of galactose alpha-1,6 linkages in amylovoran [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 39512; Mature: 39381

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKKVYIFIDDISRSGGTERVATFLSNQMFLSGFSVTLISLALEGGNTYYPLQPGVKLE
CCCCEEEEEEEECCCCCCHHHHHHHHHCHHHHCCHHEEEEEEEEECCCEEECCCCCCEEE
VLSESTLYELFLFLRKNSCDVLISVSMGSLSFKLACLHFLLRLKSRLILSEHVAFESSSK
EECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIRSLKWLSYQFADDLVLLTKHDYKLLKSNVRAHTHVINNASGFEQLSESVLIQKQKIVL
HHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHEEECCCHHHHHHHHHHHHHHHHHEE
AVGRLTYQKGFDRLIRIWASISDNHGWVLRIVGDGELRSELQKMIVDLNVTHNVQLIPAT
EHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHEECCCCCEEEEEHH
KCIEQEYTNAAILAMTSRYEGLPLVLIEAKSFGLAAVAFDCKTGPAEIIHHKKDGFLITE
HHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHEECCCCEEEEC
DNEPEFSYRLQSLMIDDVYRNKIQSMALRNANDYSVEKISRQWLELIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PMKKVYIFIDDISRSGGTERVATFLSNQMFLSGFSVTLISLALEGGNTYYPLQPGVKLE
CCCEEEEEEEECCCCCCHHHHHHHHHCHHHHCCHHEEEEEEEEECCCEEECCCCCCEEE
VLSESTLYELFLFLRKNSCDVLISVSMGSLSFKLACLHFLLRLKSRLILSEHVAFESSSK
EECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIRSLKWLSYQFADDLVLLTKHDYKLLKSNVRAHTHVINNASGFEQLSESVLIQKQKIVL
HHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHEEECCCHHHHHHHHHHHHHHHHHEE
AVGRLTYQKGFDRLIRIWASISDNHGWVLRIVGDGELRSELQKMIVDLNVTHNVQLIPAT
EHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHEECCCCCEEEEEHH
KCIEQEYTNAAILAMTSRYEGLPLVLIEAKSFGLAAVAFDCKTGPAEIIHHKKDGFLITE
HHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHEECCCCEEEEC
DNEPEFSYRLQSLMIDDVYRNKIQSMALRNANDYSVEKISRQWLELIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]