| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690033
Identifier: 218690033
GI number: 218690033
Start: 2257986
End: 2258552
Strand: Reverse
Name: 218690033
Synonym: ECED1_2311
Alternate gene names: NA
Gene position: 2258552-2257986 (Counterclockwise)
Preceding gene: 218690040
Following gene: 218690032
Centisome position: 43.35
GC content: 45.33
Gene sequence:
>567_bases ATGGGAAATGAAATGAAGAGAATCTTACTTGTGGCTGCAATGGCCTTAACAGGATGCCAACAGCTCAATGATGGCGTGAG TAAAGTCAATGGGGCAATCAGCTCTTCTTTGTCTTCAGTAGGTAAAGCGCTGAATGGAAGTACCGCCACTCAAAATCTTG GTCCAGCATCACCAGTATCAGGTCTGGGTGCTGTCTGCAAAGACTATGAAGAAAACGCAATGGCAGCAGAAAAGAAATGG ACAGGCAAAAGGATCTCTATCAGCAATGCCACAGTTCTGGAAGTTACTAAGGGCAGAAGTGCAAGCGATATGATGACGGG TATGCCCAAATCAGCCCCCCACTATTACCTGCTCTTTAAAACTGCCGATACAAGCTACTGCGGCGGTATGGTTTGGCTGG ATTACTACTCTGGTATTGATGATGCCGTTCTTACTTACAAGAAAGGCCAGAAAGTCAGCGTTACTGGAACGGTAAACAAT TTCGAAGTTCGTGGATTTGCCACAGTAAACAATGCCGATATGCCAGTTCGTCTGGTTGTTCTGAGAAACGGCACTATCAA TCATTAA
Upstream 100 bases:
>100_bases TGGTTTGCCGATACAGGTGACCTCAATGCTATCAAAAGTGATAGATAGAGAAGTTCACACGACCCATACCAGTTCAAGCC ATTTTGTTATGTATTGACCT
Downstream 100 bases:
>100_bases AAGGGATGAGAACCATGCGTCAATTTTTAGCCATTGCTGGCCTTGCTGTGTTGCTATCAGGCTGCGGTGAAAAAGGCGAT TTTGAGAAAGCGATCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MGNEMKRILLVAAMALTGCQQLNDGVSKVNGAISSSLSSVGKALNGSTATQNLGPASPVSGLGAVCKDYEENAMAAEKKW TGKRISISNATVLEVTKGRSASDMMTGMPKSAPHYYLLFKTADTSYCGGMVWLDYYSGIDDAVLTYKKGQKVSVTGTVNN FEVRGFATVNNADMPVRLVVLRNGTINH
Sequences:
>Translated_188_residues MGNEMKRILLVAAMALTGCQQLNDGVSKVNGAISSSLSSVGKALNGSTATQNLGPASPVSGLGAVCKDYEENAMAAEKKW TGKRISISNATVLEVTKGRSASDMMTGMPKSAPHYYLLFKTADTSYCGGMVWLDYYSGIDDAVLTYKKGQKVSVTGTVNN FEVRGFATVNNADMPVRLVVLRNGTINH >Mature_187_residues GNEMKRILLVAAMALTGCQQLNDGVSKVNGAISSSLSSVGKALNGSTATQNLGPASPVSGLGAVCKDYEENAMAAEKKWT GKRISISNATVLEVTKGRSASDMMTGMPKSAPHYYLLFKTADTSYCGGMVWLDYYSGIDDAVLTYKKGQKVSVTGTVNNF EVRGFATVNNADMPVRLVVLRNGTINH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19939; Mature: 19808
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEMKRILLVAAMALTGCQQLNDGVSKVNGAISSSLSSVGKALNGSTATQNLGPASPVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH GLGAVCKDYEENAMAAEKKWTGKRISISNATVLEVTKGRSASDMMTGMPKSAPHYYLLFK HHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCHHHHHHCCCCCCCEEEEEEE TADTSYCGGMVWLDYYSGIDDAVLTYKKGQKVSVTGTVNNFEVRGFATVNNADMPVRLVV ECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEE LRNGTINH EECCCCCC >Mature Secondary Structure GNEMKRILLVAAMALTGCQQLNDGVSKVNGAISSSLSSVGKALNGSTATQNLGPASPVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH GLGAVCKDYEENAMAAEKKWTGKRISISNATVLEVTKGRSASDMMTGMPKSAPHYYLLFK HHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCHHHHHHCCCCCCCEEEEEEE TADTSYCGGMVWLDYYSGIDDAVLTYKKGQKVSVTGTVNNFEVRGFATVNNADMPVRLVV ECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEE LRNGTINH EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA