| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690032
Identifier: 218690032
GI number: 218690032
Start: 2257420
End: 2257980
Strand: Reverse
Name: 218690032
Synonym: ECED1_2310
Alternate gene names: NA
Gene position: 2257980-2257420 (Counterclockwise)
Preceding gene: 218690033
Following gene: 218690031
Centisome position: 43.34
GC content: 42.96
Gene sequence:
>561_bases ATGAGAACCATGCGTCAATTTTTAGCCATTGCTGGCCTTGCTGTGTTGCTATCAGGCTGCGGTGAAAAAGGCGATTTTGA GAAAGCGATCAACGCGAAAATTTCACAATCAAAGCTGTGCTACTCACTGCAGAACAATGACTTTGCATTCAATAAAGGTT TTCCTATAAAGGTTAATCATGGCTACCGTTCTGCAGGATACAATGTTAGTGATGAAATCCTTAAAGGACTTGCTGAACAA GGGTTGCTCACTGTTTCACAACAGGCAAATGGCTTTAGCAGTGTCGATGTTCTGGAAGTAACAGACAAAGGGCAAAATGT TGAGTTTTGGAACCGGGCAGAAGGTGCGTGTATTGGTCATCGTGAAGTTGATGAAGTGAAGGAATGGACTGAGCCGGGCA ACGGTAATCAGCAGGTTGTTCATGTTAGTTATACATGGAAGTTGGCGGATGTTCCTTCATGGGTGGATAAAAAAGCATTC GCAAACGTCAAGGGTATGAATGAACCTGAAGATGGCGCAATTAATTTAGTTAAAACAAGCAATGGCTGGAAAGCGCTCTA A
Upstream 100 bases:
>100_bases TAAACAATTTCGAAGTTCGTGGATTTGCCACAGTAAACAATGCCGATATGCCAGTTCGTCTGGTTGTTCTGAGAAACGGC ACTATCAATCATTAAAAGGG
Downstream 100 bases:
>100_bases GGGGTCTATCATGGAAAACAATACAATCCAGTGTCCGTTTTGCCTGAAAGAGAGCCAGCGCGGTGTGCATGTTTGTACTG GCTGCATGGCGACGGTTCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRTMRQFLAIAGLAVLLSGCGEKGDFEKAINAKISQSKLCYSLQNNDFAFNKGFPIKVNHGYRSAGYNVSDEILKGLAEQ GLLTVSQQANGFSSVDVLEVTDKGQNVEFWNRAEGACIGHREVDEVKEWTEPGNGNQQVVHVSYTWKLADVPSWVDKKAF ANVKGMNEPEDGAINLVKTSNGWKAL
Sequences:
>Translated_186_residues MRTMRQFLAIAGLAVLLSGCGEKGDFEKAINAKISQSKLCYSLQNNDFAFNKGFPIKVNHGYRSAGYNVSDEILKGLAEQ GLLTVSQQANGFSSVDVLEVTDKGQNVEFWNRAEGACIGHREVDEVKEWTEPGNGNQQVVHVSYTWKLADVPSWVDKKAF ANVKGMNEPEDGAINLVKTSNGWKAL >Mature_186_residues MRTMRQFLAIAGLAVLLSGCGEKGDFEKAINAKISQSKLCYSLQNNDFAFNKGFPIKVNHGYRSAGYNVSDEILKGLAEQ GLLTVSQQANGFSSVDVLEVTDKGQNVEFWNRAEGACIGHREVDEVKEWTEPGNGNQQVVHVSYTWKLADVPSWVDKKAF ANVKGMNEPEDGAINLVKTSNGWKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20442; Mature: 20442
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTMRQFLAIAGLAVLLSGCGEKGDFEKAINAKISQSKLCYSLQNNDFAFNKGFPIKVNH CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCEEECCCCCEEECC GYRSAGYNVSDEILKGLAEQGLLTVSQQANGFSSVDVLEVTDKGQNVEFWNRAEGACIGH CCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCEECCCCCCEECC REVDEVKEWTEPGNGNQQVVHVSYTWKLADVPSWVDKKAFANVKGMNEPEDGAINLVKTS CCHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEC NGWKAL CCCCCC >Mature Secondary Structure MRTMRQFLAIAGLAVLLSGCGEKGDFEKAINAKISQSKLCYSLQNNDFAFNKGFPIKVNH CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCEEECCCCCEEECC GYRSAGYNVSDEILKGLAEQGLLTVSQQANGFSSVDVLEVTDKGQNVEFWNRAEGACIGH CCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCEECCCCCCEECC REVDEVKEWTEPGNGNQQVVHVSYTWKLADVPSWVDKKAFANVKGMNEPEDGAINLVKTS CCHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEC NGWKAL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA