Click here to switch to the map view.

The map label for this gene is 218690028

Identifier: 218690028

GI number: 218690028

Start: 2255050

End: 2256069

Strand: Reverse

Name: 218690028

Synonym: ECED1_2306

Alternate gene names: NA

Gene position: 2256069-2255050 (Counterclockwise)

Preceding gene: 218690029

Following gene: 218690027

Centisome position: 43.31

GC content: 30.49

Gene sequence:

>1020_bases
ATGAATCATGACTCCTTGAAAGAAAAAGCATTTCAAAGAGAACATTTAATAACCGCCAGTATTGAGTTAACTCAGTATTG
TAATTTTAAATGTCTCCATTGTTATTGTCCAACGAAAAAAGTTCATATGGATTATAATGATGTTATTGCATGTATCGATA
AATTATACAGCATGGGAGTTTTGTACCTTACATTTACTGGTGGTGAGGCTTTTTTATATAAAAGATTTGATGAGATATAT
ACATATGCAAAAAATAAAGGATTTATCATCTCGATTATGTCAAATTTATCTTACATAACGGATGTGACTAAAAAAATTCT
TATCAAATACCCACCCAAAGTTATCATGATTACGTTATATGGTACTGGTGCTGACGAATACGCAAAGTTCACTATAAATA
AAAGTGCTTTTAAAAGAGTGATCGAAAATATAAAGTTTTTATATTCTAATAATATTGATTTCATGTTGAAAGCAATTATA
GGAAAAGAAACCATACCAGCAGCTTTGGAAGGAAAGTTTGATGATATTGCTAGAGTTTATAAAAAAGAAATTATGTATGA
TGCCATAATTTTCCCACAAAAAGATTTAATGAGAGGTAAACTATCTCAAAGAGCTAGTATTGATGATATTATTAACTTTG
AGCATAGTAATCCAGAAACTGTAAGTTTCTGGAGGAAATCAATATCTAATATGACTTCACAAGCATGTATTAAATGTGGT
GGTGGCATTAATAGCCTTTCAATAGATGCTGGAGGATATGCATCTATATGTTCTTTATATGTGGAAGATAAAATTAGTTT
TTTGAGTAATGATGAGAAAACCATAAGGAAATACTTGAAAGATTCACATAATAAAATGCAAAGTTATTATATCAATAGCA
AATGCTCTACATGTGATCAAAAATCCATTTGCAGATGGTGTGCGGCATATGCCAATTTGGAACATGGAAATTCATCAGAA
CCGATAGATTTTATGTGCGAGTTAGCACAACGCAGAATTTCTGCGTTTACGGAGGTATAA

Upstream 100 bases:

>100_bases
ATGTATTCAACTGAAATAAAAAACAATAAGTTGGAAAAGAAATATGGATTTGATGACATTCAAATCCAAAACGTATTAGA
TAAAATATATGGTAAGCTAA

Downstream 100 bases:

>100_bases
TGAAAGATTTAACATCTGCTACCATTGAAATTATAACATCATGTAATTTTAAATGTCCGCATTGTTATCTTGATAATAAA
ACCTCATTAGGATTAAATGT

Product: putative Radical SAM superfamily

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Superfamily Protein; Radical Sam Domain Protein; Radical SAM Domain Heme Biosynthesis Protein

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNHDSLKEKAFQREHLITASIELTQYCNFKCLHCYCPTKKVHMDYNDVIACIDKLYSMGVLYLTFTGGEAFLYKRFDEIY
TYAKNKGFIISIMSNLSYITDVTKKILIKYPPKVIMITLYGTGADEYAKFTINKSAFKRVIENIKFLYSNNIDFMLKAII
GKETIPAALEGKFDDIARVYKKEIMYDAIIFPQKDLMRGKLSQRASIDDIINFEHSNPETVSFWRKSISNMTSQACIKCG
GGINSLSIDAGGYASICSLYVEDKISFLSNDEKTIRKYLKDSHNKMQSYYINSKCSTCDQKSICRWCAAYANLEHGNSSE
PIDFMCELAQRRISAFTEV

Sequences:

>Translated_339_residues
MNHDSLKEKAFQREHLITASIELTQYCNFKCLHCYCPTKKVHMDYNDVIACIDKLYSMGVLYLTFTGGEAFLYKRFDEIY
TYAKNKGFIISIMSNLSYITDVTKKILIKYPPKVIMITLYGTGADEYAKFTINKSAFKRVIENIKFLYSNNIDFMLKAII
GKETIPAALEGKFDDIARVYKKEIMYDAIIFPQKDLMRGKLSQRASIDDIINFEHSNPETVSFWRKSISNMTSQACIKCG
GGINSLSIDAGGYASICSLYVEDKISFLSNDEKTIRKYLKDSHNKMQSYYINSKCSTCDQKSICRWCAAYANLEHGNSSE
PIDFMCELAQRRISAFTEV
>Mature_339_residues
MNHDSLKEKAFQREHLITASIELTQYCNFKCLHCYCPTKKVHMDYNDVIACIDKLYSMGVLYLTFTGGEAFLYKRFDEIY
TYAKNKGFIISIMSNLSYITDVTKKILIKYPPKVIMITLYGTGADEYAKFTINKSAFKRVIENIKFLYSNNIDFMLKAII
GKETIPAALEGKFDDIARVYKKEIMYDAIIFPQKDLMRGKLSQRASIDDIINFEHSNPETVSFWRKSISNMTSQACIKCG
GGINSLSIDAGGYASICSLYVEDKISFLSNDEKTIRKYLKDSHNKMQSYYINSKCSTCDQKSICRWCAAYANLEHGNSSE
PIDFMCELAQRRISAFTEV

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38840; Mature: 38840

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDSLKEKAFQREHLITASIELTQYCNFKCLHCYCPTKKVHMDYNDVIACIDKLYSMGV
CCCHHHHHHHHHHHHHEEEEEEHHHHCCEEEEEEECCCCEEECCHHHHHHHHHHHHHCCE
LYLTFTGGEAFLYKRFDEIYTYAKNKGFIISIMSNLSYITDVTKKILIKYPPKVIMITLY
EEEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
GTGADEYAKFTINKSAFKRVIENIKFLYSNNIDFMLKAIIGKETIPAALEGKFDDIARVY
CCCCCHHHEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHH
KKEIMYDAIIFPQKDLMRGKLSQRASIDDIINFEHSNPETVSFWRKSISNMTSQACIKCG
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GGINSLSIDAGGYASICSLYVEDKISFLSNDEKTIRKYLKDSHNKMQSYYINSKCSTCDQ
CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCH
KSICRWCAAYANLEHGNSSEPIDFMCELAQRRISAFTEV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNHDSLKEKAFQREHLITASIELTQYCNFKCLHCYCPTKKVHMDYNDVIACIDKLYSMGV
CCCHHHHHHHHHHHHHEEEEEEHHHHCCEEEEEEECCCCEEECCHHHHHHHHHHHHHCCE
LYLTFTGGEAFLYKRFDEIYTYAKNKGFIISIMSNLSYITDVTKKILIKYPPKVIMITLY
EEEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
GTGADEYAKFTINKSAFKRVIENIKFLYSNNIDFMLKAIIGKETIPAALEGKFDDIARVY
CCCCCHHHEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHH
KKEIMYDAIIFPQKDLMRGKLSQRASIDDIINFEHSNPETVSFWRKSISNMTSQACIKCG
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GGINSLSIDAGGYASICSLYVEDKISFLSNDEKTIRKYLKDSHNKMQSYYINSKCSTCDQ
CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCH
KSICRWCAAYANLEHGNSSEPIDFMCELAQRRISAFTEV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA