Click here to switch to the map view.

The map label for this gene is traR [C]

Identifier: 218689985

GI number: 218689985

Start: 2197485

End: 2197694

Strand: Direct

Name: traR [C]

Synonym: ECED1_2258

Alternate gene names: 218689985

Gene position: 2197485-2197694 (Clockwise)

Preceding gene: 218689984

Following gene: 218689986

Centisome position: 42.18

GC content: 51.9

Gene sequence:

>210_bases
GTGCCAGATGAAATCGATCGCGATCAGGCGTTTAATGAACGGTGCCTAGAAGCACTGATTGAACAAAGCCGGTTAAGACC
CACACCGACACCTTCCCTGCAGCACTGTCGATTATGCGGCAAGGCTATTCCGGAAAAACGCCGTCAGACGCTGCCGGGTG
TAACAACCTGTACTGACTGTCAGTCGATACTGGAGAAACGCAGACGTTAA

Upstream 100 bases:

>100_bases
GTTACAGAAAACCTTTCATCGTGTACTGCCCCCTCGCTGACCGTTGTCTGGAACTGCATCACGCATTGCGAAAGAAAGAA
CACGGTAAGGAGAATACAAC

Downstream 100 bases:

>100_bases
ATCTGTATGTGCGGAGGAGAATAGCTCCGCACATTTTAATATGCACCAGCCGGCTTGTTTTCAGGTTCCCGTGCCTCCAT
GTCATGGATGAATAACCTGC

Product: putative lambdoid prophage protein from the DksA/TraR family with a zinc finger

Products: NA

Alternate protein names: Transcriptional Regulator TraR/DksA Family

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRLCGKAIPEKRRQTLPGVTTCTDCQSILEKRRR

Sequences:

>Translated_69_residues
MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRLCGKAIPEKRRQTLPGVTTCTDCQSILEKRRR
>Mature_68_residues
PDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRLCGKAIPEKRRQTLPGVTTCTDCQSILEKRRR

Specific function: Unknown. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8007; Mature: 7876

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRLCGKAIPEKRRQTLPGVTTCTDC
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCHHHH
QSILEKRRR
HHHHHHHCC
>Mature Secondary Structure 
PDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRLCGKAIPEKRRQTLPGVTTCTDC
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCHHHH
QSILEKRRR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA