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The map label for this gene is fliC [H]

Identifier: 218689916

GI number: 218689916

Start: 2119197

End: 2120657

Strand: Reverse

Name: fliC [H]

Synonym: ECED1_2188

Alternate gene names: 218689916

Gene position: 2120657-2119197 (Counterclockwise)

Preceding gene: 218689921

Following gene: 218689915

Centisome position: 40.71

GC content: 44.28

Gene sequence:

>1461_bases
ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCTTCTCTTAGCTC
TGCTATTGAGCGTCTCTCTTCTGGCCTGCGTATTAACAGTGCTAAAGATGACGCAGCAGGTCAGGCGATTGCTAACCGTT
TTACGGCAAATATTAAAGGTCTGACTCAGGCTTCCCGTAACGCGAATGATGGTATTTCTGTTGCGCAGACTACTGAAGGT
GCGCTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAACTGACTGTTCAGGCAACTAACGGTACTAACTCTGACAG
CGATCTTTCTTCTATTCAGGCAGAAATTACTCAACGTCTGGAAGAAATTGACCGTGTATCTGAGCAAACTCAGTTTAACG
GCGTGAAAGTCCTTGCCGAAAATAATGAAATGAAAATTCAGGTTGGTGCTAATGATGGGGAAACCATCACTATCAATCTG
GCAAAAATTGATGCGAAAACTCTCGGCCTGGACGGCTTTAATATCGATGGCGCGCAGAAAGCAACTGGCAGTGACCTGAT
TTCTAAATTTAAAGCGACAGGTACTGATAATTATCAAATTAACGGTACTGATAACTATACTGTTAATGTAGATAGTGGAG
CAGTTCAAAATGAGGATGGTGACGCAATTTTTGTTAGCGCTACCGATGGTTCTCTGACTACTAAGAGTGATACAAAAGTC
GGTGGTACAGGTATTGATGCGACTGGGCTTGCAAAAGCCGCAGTTTCTTTAGCTAAAGATGCCTCAATTAAATACCAAGG
TATTACTTTCACCAACAAAGGCACTGATGCATTTGATGGCAGTGGTAACGGCACTCTAACCGCTAATATTGATGGCAAAG
ATGTAACCTTTACTATTGATGCGACAGGGAAGGACGCAACATTAAAAACGTCTGATCCTGTTTACAAAAATAGTGCAGGT
CAGTTCACTACAACTAAGGTTGAAAACAAAGCCGCTACAGCATCGGATCTGGACTTAAATAACGCTAAAAAAGTGGGTAG
TTCTTTAGTTGTAAATGGCGCTGATTATGAAGTTAGCGCTGATGGTAAGACAGTAACTGGGCTTGGCAAAACTATGTATC
TGAGCAAATCAGAAGGTGGTAGCCCGATTCTGGTAAAAGAAGATGCAGCAAAATCGTTGCAATCTACTACCAACCCGCTC
GAAACCATCGACAAGGCATTGGCTAAAGTTGACAATCTGCGTTCTGACCTCGGTGCAGTACAAAACCGTTTCGACTCTGC
TATCACCAACCTTGGCAACACCGTAAACAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTACGCGACCGAAG
TGTCTAACATGTCTCGTGCGCAGATCCTGCAACAAGCGGGTACCTCTGTTCTGGCGCAGGCTAACCAGACCACGCAGAAC
GTACTGTCTCTGCTGCGTTAA

Upstream 100 bases:

>100_bases
TTTCTAAAGTTCGAAATTCAGGTGCCGATACAAGGGGTACGGTGAGAAACCGTGGGCAACAGCCCAATAACATCAAGTTG
TAATTGATAAGGAAAAGATC

Downstream 100 bases:

>100_bases
TTTACACTTATCGCTCAAACCCCGCCAACGGCGGGGTTTTTTCTGTCCGCAATTTACCGGTAACCCCCAAATAACCCCTC
ATTTCACCCACTAATCGTCC

Product: Flagellin (Phase 1-C flagellin)

Products: NA

Alternate protein names: Phase 1-I flagellin [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG
ALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINL
AKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKV
GGTGIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATGKDATLKTSDPVYKNSAG
QFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGKTVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPL
ETIDKALAKVDNLRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQN
VLSLLR

Sequences:

>Translated_486_residues
MAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG
ALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINL
AKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKV
GGTGIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATGKDATLKTSDPVYKNSAG
QFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGKTVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPL
ETIDKALAKVDNLRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQN
VLSLLR
>Mature_485_residues
AQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEGA
LNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLA
KIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVG
GTGIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATGKDATLKTSDPVYKNSAGQ
FTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGKTVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLE
TIDKALAKVDNLRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNV
LSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=513, Percent_Identity=52.8265107212476, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 50866; Mature: 50735

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKG
CCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRL
HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHH
EEIDRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQK
HHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCEEEEEEEEECHHHCCCCCCCCCCCCC
ATGSDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKV
CCHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEECCCCCC
GGTGIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTID
CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEE
ATGKDATLKTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSA
CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCEEEECCCCEEEEC
DGKTVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAV
CCCEEECCCCEEEEECCCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQN
HHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH
VLSLLR
HHHHHC
>Mature Secondary Structure 
AQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKG
CEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRL
HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHH
EEIDRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQK
HHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCEEEEEEEEECHHHCCCCCCCCCCCCC
ATGSDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKV
CCHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEECCCCCC
GGTGIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTID
CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEE
ATGKDATLKTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSA
CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCEEEECCCCEEEEC
DGKTVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAV
CCCEEECCCCEEEEECCCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQN
HHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH
VLSLLR
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8146152; 7690024 [H]