Click here to switch to the map view.

The map label for this gene is torY [H]

Identifier: 218689871

GI number: 218689871

Start: 2076400

End: 2077500

Strand: Reverse

Name: torY [H]

Synonym: ECED1_2142

Alternate gene names: 218689871

Gene position: 2077500-2076400 (Counterclockwise)

Preceding gene: 218689872

Following gene: 218689870

Centisome position: 39.88

GC content: 47.5

Gene sequence:

>1101_bases
ATGCGAGGAAAAAAACGCATTGGGTTATTGTTTCTGCTGATAGCGGTTGTGGTTGGTGGCGGCGGGTTATTGCTGGCGCA
AAAAGCCTTACATAAAACGTCGGATACCGCATTTTGCCTTTCCTGCCACTCGATGAGTAAACCTTTTGAGGAATATCAGG
GAACTGTCCACTTTTCAAACCAGAAAGGGATACGTGCGGAATGTGCCGATTACCATATTCCAAAGTCAGGGATGGATTAT
TTATTTGCTAAATTAAAAGCATCTAAAGATATTTATCATGAATTTGTTAGCGGCAAAATAGACAGTGACGATAAGTTCGA
AGCTCATCGCCAGGAAATGGCCGAAACAGTATGGAAAGAATTAAAAGCAACTGACTCTGCAACCTGCCGTAGTTGCCATT
CTTTTGATGCCATGGATATTGCCTCGCAAAGTGAATCTGCGCAGAAAATGCATAATAAAGCGCAAAAGGACGTTGAAACG
TGTATCGATTGCCATAAAGGCATTGCCCATTTCCCGCCAGAAATAAAAATGGATGACAACGCGGCGCATGAGCTGGAAAG
TCAGGCCGCTACTTCAGTGACTAATGGCGCACATATTTATCCTTTCAAAACTTCTCGCATAGGCGACTTGGCTACCGTGA
CTCCTGGTACCGATCTCACCGTCGTTGATGCCAGTGGCAAACAGCCAATTGTTCGGTTGCAGGGTTATCAAATGCAGGGT
AGTGAAAACACGCTCTACCTGGCGGCAGGTCAACGGCTGGCGCTAGCCACATTAAGTGAAGAAGGTATCAAGGCGCTAAC
GGTAAACGGGGAATGGCAGGCTGACGAATACGGCAATCAATGGCGTCAGGCGTCTTTACAGGGTGCGCTTACCGATCCCG
CATTAGCGGACCGTAAACCGCTATGGCAATACGCTGAAAAACTTGACGATACCTATTGCGCTGGCTGCCATGCCCCTATT
GCCGCCGACCATTACACCGTCAATACATGGCCGTCCATTGCCAAAGGAATGGGTGCGCGAACCAGCATGAGCGAAAACGA
ACTGGACATTTTGACGCGGTACTTCCAGTACAACGCCAAAGATATTACCGAGAAACAGTGA

Upstream 100 bases:

>100_bases
TATTTCAGGCAGTGTTGTGCCGAATTAAGCAAGTAGTCAATTCGTTGTATATTTATTTATACAATGGTGTCGGTGTCCTG
GAATTTAATTAGAGGAATCT

Downstream 100 bases:

>100_bases
TCCTCGTTGATCAGGGAGGAAGTTATGACATTAACAAGACGTGAATTTATTAAACATAGCGGTATTGCGGCAGGGGCGCT
GGTGGTGACATCGGCTGCAC

Product: TMAO reductase III (TorYZ), cytochrome c-type subunit

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSNQKGIRAECADYHIPKSGMDY
LFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDVET
CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSRIGDLATVTPGTDLTVVDASGKQPIVRLQGYQMQG
SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPI
AADHYTVNTWPSIAKGMGARTSMSENELDILTRYFQYNAKDITEKQ

Sequences:

>Translated_366_residues
MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSNQKGIRAECADYHIPKSGMDY
LFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDVET
CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSRIGDLATVTPGTDLTVVDASGKQPIVRLQGYQMQG
SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPI
AADHYTVNTWPSIAKGMGARTSMSENELDILTRYFQYNAKDITEKQ
>Mature_366_residues
MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSNQKGIRAECADYHIPKSGMDY
LFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDVET
CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSRIGDLATVTPGTDLTVVDASGKQPIVRLQGYQMQG
SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPI
AADHYTVNTWPSIAKGMGARTSMSENELDILTRYFQYNAKDITEKQ

Specific function: Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorZ. Required for electron transfer to the TorZ terminal enzyme [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TorC/TorY family [H]

Homologues:

Organism=Escherichia coli, GI1788181, Length=366, Percent_Identity=97.8142076502732, Blast_Score=726, Evalue=0.0,
Organism=Escherichia coli, GI1787230, Length=374, Percent_Identity=34.2245989304813, Blast_Score=214, Evalue=9e-57,
Organism=Escherichia coli, GI1788530, Length=180, Percent_Identity=42.7777777777778, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009154
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 40396; Mature: 40396

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHCCCEEECC
QKGIRAECADYHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKE
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDVETCIDCHKGIAHFPPEIKMDDN
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEECCC
AAHELESQAATSVTNGAHIYPFKTSRIGDLATVTPGTDLTVVDASGKQPIVRLQGYQMQG
HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEECEEECC
SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKP
CCCEEEEECCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH
LWQYAEKLDDTYCAGCHAPIAADHYTVNTWPSIAKGMGARTSMSENELDILTRYFQYNAK
HHHHHHHHCCHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
DITEKQ
CCCCCC
>Mature Secondary Structure
MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHCCCEEECC
QKGIRAECADYHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKE
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDVETCIDCHKGIAHFPPEIKMDDN
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEECCC
AAHELESQAATSVTNGAHIYPFKTSRIGDLATVTPGTDLTVVDASGKQPIVRLQGYQMQG
HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEECEEECC
SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKP
CCCEEEEECCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH
LWQYAEKLDDTYCAGCHAPIAADHYTVNTWPSIAKGMGARTSMSENELDILTRYFQYNAK
HHHHHHHHCCHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
DITEKQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]