Click here to switch to the map view.

The map label for this gene is lpxM [H]

Identifier: 218689793

GI number: 218689793

Start: 2008408

End: 2009379

Strand: Reverse

Name: lpxM [H]

Synonym: ECED1_2060

Alternate gene names: 218689793

Gene position: 2009379-2008408 (Counterclockwise)

Preceding gene: 218689794

Following gene: 218689790

Centisome position: 38.57

GC content: 50.51

Gene sequence:

>972_bases
ATGGAAACGAAAAAAAATAATAGCGAATACATTCCTGAGTTTGATAAATCCTTTCGCCACCCGCGCTACTGGGGAGCATG
GCTGGGCGTAGCAGCGATGGCGGGTATCGCTTTAACGCCGCCAAAGTTCCGTGATCCCATTCTGGCACGGCTGGGACGTT
TTGCCGGACGACTGGGAAAAAGCTCACGCCGTCGTGCGTTAATCAATCTGTCGCTCTGCTTTCCAGAACGTAGTGAAGCT
GAACGCGAAGCGATTGTAGATGAGATGTTTGCCACCGCGCCGCAAGCGATGGTAATGATGGCTGAGTTGGCAATACGCGG
GCCGGAGAAAATTCAGCCGCGCGTTGACTGGCAAGGGCTGGAGATCATCGAAGAGATGCGGCGTAATAATGAGAAAGTGA
TTTTTCTGGTGCCGCACGGTTGGGCCGTCGATATTCCTGCCATGCTGATGGCCTCGCAAGGGCAGAAAATGGCAGCGATG
TTCCATAATCAGGGCAACCCGGTTTTTGATTATGTCTGGAACACGGTGCGTCGTCGCTTTGGTGGTCGTCTGCATGCGAG
AAATGATGGTATTAAACCATTCATCCAGTCGGTACGTCAGGGTTACTGGGGATATTATTTACCCGATCAGGATCATGGCC
CAGAACACAGCGAATTTGTTGATTTCTTTGCCACCTATAAAGCGACGTTGCCCGCGATTGGTCGTTTGATGAAAGTGTGC
CGTGCGCGCGTTGTACCGCTATTTCCGATTTATGATGGCAAGACGCATCGTCTGACGATTCAGGTGCGCCCACCGATGGA
TGATCTGTTAGAGGCGGATGATCATACGATTGCGCGGCGGATGAATGAAGAAGTCGAGATTTTTGTTGGTCCGCGACCAG
AACAATACACCTGGATATTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAACCGTATAAGCGCAAAGATCTTTAT
CCCATCAAATAA

Upstream 100 bases:

>100_bases
CGGTACGCAGTCAGTACCGGCTTTTTTATTTGGTGCGGGGCAAGTTGCGCCGCTACACTATCACCAGATTGATTTTTGCC
TTATCCGAAACTGGAAAAGC

Downstream 100 bases:

>100_bases
AAAATGCCTCTCGCGAGGAGAGGCCTTCGACTGATGATAAGTTCAAGTTTGCTTCAGAAGATTCGAAATCTGTTGAATCA
TCATTGAACTGTAGGCCGGA

Product: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEA
EREAIVDEMFATAPQAMVMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC
RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLY
PIK

Sequences:

>Translated_323_residues
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEA
EREAIVDEMFATAPQAMVMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC
RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLY
PIK
>Mature_323_residues
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEA
EREAIVDEMFATAPQAMVMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC
RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLY
PIK

Specific function: Transfers myristate or laurate, activated on ACP, to (KDO)2-(lauroyl)-lipid IVA [H]

COG id: COG1560

COG function: function code M; Lauroyl/myristoyl acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the htrB/msbB family [H]

Homologues:

Organism=Escherichia coli, GI1788161, Length=323, Percent_Identity=99.6904024767802, Blast_Score=668, Evalue=0.0,
Organism=Escherichia coli, GI1787292, Length=309, Percent_Identity=29.7734627831715, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI87082094, Length=307, Percent_Identity=26.3843648208469, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004960
- InterPro:   IPR011921 [H]

Pfam domain/function: PF03279 Lip_A_acyltrans [H]

EC number: 2.3.1.-

Molecular weight: Translated: 37439; Mature: 37439

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGK
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
SSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMVMMAELAIRGPEKIQPRVDWQGL
CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHCCCCCCCCHH
EIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRF
HHHHHHHCCCCEEEEEECCCCEECHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
GGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC
CCEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWIL
HHHCCEEEEEECCCEEEEEEEECCCHHHHHCCCCHHHHHHCCCCEEEEECCCCCHHHHHH
KLLKTRKPGEIQPYKRKDLYPIK
HHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGK
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
SSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMVMMAELAIRGPEKIQPRVDWQGL
CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHCCCCCCCCHH
EIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRF
HHHHHHHCCCCEEEEEECCCCEECHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
GGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC
CCEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWIL
HHHCCEEEEEECCCEEEEEEEECCCHHHHHCCCCHHHHHHCCCCEEEEECCCCCHHHHHH
KLLKTRKPGEIQPYKRKDLYPIK
HHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12384590; 12704152 [H]