| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is spy [H]
Identifier: 218689684
GI number: 218689684
Start: 1901112
End: 1901597
Strand: Reverse
Name: spy [H]
Synonym: ECED1_1945
Alternate gene names: 218689684
Gene position: 1901597-1901112 (Counterclockwise)
Preceding gene: 218689685
Following gene: 218689683
Centisome position: 36.5
GC content: 51.03
Gene sequence:
>486_bases ATGCGTAAATTAACTGCACTGTTTGTTGCCTCTACCCTGGCTCTTGGCGCGGCTAACCTGGCCCATGCCGCAGACACCAC TACCGCAGCACCGGCTGACGCGAAGCCGATGATGCACCATAAAGGCAAGTTCGGTCCGCATGAGGACATGATGTTCAAAG ACCTGAACCTGACCGACGCGCAGAAACAGCAGATCCGCGAAATCATGAAAGGCCAGCGTGACCAGATGAAACGTCCGCCG CTGGAAGAACGCCGCGCAATGCATGACATCATTGCCAGCGATACCTTCGATAAAGCAAAAGCTGAAGCGCAGATCGCAAA AATGGAAGAACAGCGCAAAGCTAACATGCTGGCGCACATGGAAACCCAGAACAAGATTTACAACATCCTGACGCCGGAAC AGAAAAAGCAATTTAATGCTAATTTTGAGAAGCGTCTGACAGAACGTCCAGCGGCAAAAGGTAAAATGCCTGCAACTGCT GAATAA
Upstream 100 bases:
>100_bases CTCAGATTAATTGACGCTAAAGTCAGTAAAGTTAATCTCGTCAACACGGCACGCTACTTAAGAAAGCCGTAATAAATAAC TGAAAGGAAGGATATAGAAT
Downstream 100 bases:
>100_bases TCTTTCAGCCAAAAAACGTAAGACCGCCGGTCTTGTCCACTACCTTGCAGTAATGCGGTGGACAGGATCGGCGGTTTTCT TTTCTCTTCTCAAACAGATG
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHEDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPP LEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA E
Sequences:
>Translated_161_residues MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHEDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPP LEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA E >Mature_161_residues MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHEDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPP LEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA E
Specific function: Could be involved in zinc resistance or another aspect of zinc metabolism [H]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli CpxP [H]
Homologues:
Organism=Escherichia coli, GI1788039, Length=161, Percent_Identity=98.7577639751553, Blast_Score=323, Evalue=2e-90, Organism=Escherichia coli, GI48994991, Length=156, Percent_Identity=29.4871794871795, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012899 [H]
Pfam domain/function: PF07813 LTXXQ [H]
EC number: NA
Molecular weight: Translated: 18172; Mature: 18172
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHEDMMFKDLNLTDA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHH QKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHM HHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE HHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHEDMMFKDLNLTDA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHH QKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHM HHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE HHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9068658; 9097039; 9278503; 9694902 [H]