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The map label for this gene is ynhG [H]

Identifier: 218689620

GI number: 218689620

Start: 1835215

End: 1836219

Strand: Reverse

Name: ynhG [H]

Synonym: ECED1_1877

Alternate gene names: 218689620

Gene position: 1836219-1835215 (Counterclockwise)

Preceding gene: 218689621

Following gene: 218689617

Centisome position: 35.25

GC content: 52.64

Gene sequence:

>1005_bases
ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCC
GCTACCACCAACCGGCAGTCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCCA
TCGCCCGACGTTTTGATACTGCGGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCCGGTACG
ACGATAACTATTCCTTCACAACTATTATTACCTGATGCGCCGCGTCAGGGGATTATTGTAAACCTTGCAGAGCTGCGCCT
TTATAATTATCCGCCGGGAGAAAATATCGTGCAGGTTTATCCGATAGGTATTGGTTTGCAGGGGCTGGAAACGCCGGTGA
TGGAAACGCGTGTGGGGCAGAAAATCCCTAACCCAACCTGGACGCCTACGGCGGGCATTCGTCAACGTTCGCTGGAACGT
GGCATTAAATTACCACCAGTCGTTCCTGCCGGGCCCAATAACCCACTAGGACGTTACGCACTGCGCCTCGCGCATGGTAA
TGGCGAATACCTCATTCATGGCACCAGTGCGCCGGACAGCGTCGGTTTGCGCGTCAGTTCGGGCTGTATTCGCATGAATG
CACCGGATATTAAAGCTTTATTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCC
GTGGAACCTAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCGGCAGAAGAACAGCAGAACGTTCAGACAATGCC
GTACACGCTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATC
GTCGGGCAGGGTATCCGGTTGCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATGCGCCTTCAGTAGAGTCAGCGCAG
AATGGGGAACCAGAGCAAGGGAATATGTTACGCGCGACGCAGTAG

Upstream 100 bases:

>100_bases
ATGTTTACACTGGCCTGCACAGGAGTGTTTTGGTTTCAGGTGAACATAAGCGCCATCCGACGTTTCAGCGTGAGTCTCCG
GCAAATACAGGAGGTTTACA

Downstream 100 bases:

>100_bases
CGGTAAATAGCAGGCAAAAAAATGGCGCACAATGTGCGCCATTTTTCACTTCACAGGTACTATTACTTGCGGTATTTAGT
AGCCATGTTGTCCAGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYNYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVAVSSGATPAASNAPSVESAQ
NGEPEQGNMLRATQ

Sequences:

>Translated_334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYNYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVAVSSGATPAASNAPSVESAQ
NGEPEQGNMLRATQ
>Mature_334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYNYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVAVSSGATPAASNAPSVESAQ
NGEPEQGNMLRATQ

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=334, Percent_Identity=99.1017964071856, Blast_Score=670, Evalue=0.0,
Organism=Escherichia coli, GI1787356, Length=280, Percent_Identity=52.1428571428571, Blast_Score=287, Evalue=7e-79,
Organism=Escherichia coli, GI1788299, Length=311, Percent_Identity=45.016077170418, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1787040, Length=302, Percent_Identity=45.6953642384106, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 35990; Mature: 35990

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT
CCCHHEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYNYPPGENIVQVY
EEEEEEECCCEECCCCCCCCEEEECCCEECCCCCCCCEEEEEEHEEEECCCCCCCEEEEE
PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA
EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHEECCCEEEE
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV
ECCCCEEEEEECCCCCCHHHCCCEECCEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCE
AVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT
CCCHHEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYNYPPGENIVQVY
EEEEEEECCCEECCCCCCCCEEEECCCEECCCCCCCCEEEEEEHEEEECCCCCCCEEEEE
PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA
EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHEECCCEEEE
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV
ECCCCEEEEEECCCCCCHHHCCCEECCEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCE
AVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]