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The map label for this gene is int [C]

Identifier: 218689545

GI number: 218689545

Start: 1754788

End: 1756017

Strand: Reverse

Name: int [C]

Synonym: ECED1_1798

Alternate gene names: 218689545

Gene position: 1756017-1754788 (Counterclockwise)

Preceding gene: 218689546

Following gene: 218689544

Centisome position: 33.71

GC content: 50.73

Gene sequence:

>1230_bases
GTGAGCAGAGCAATGAACAAACTGAGCGATACCTTGCTAAGGAAACTTCATGGTAAGCCAGCGGAGAAAAACACGTTTTA
TAGTGATGGCGGAAACCTGAGCGTGAAATATTTAACATCAGGGAAATTGACCTGGTATTTCACATACAGGGCCGGAACGG
GAAGGGAGACACGACCCGAACGCATTAAGCTGGGAAGTTATCCTGATCTGAGCCTGAAAGCAGCCAGGGAAAAAGCCGCA
CAGTGTCGCACATGGCTGGCTGAGGGGAAAAATCCACGTCATGAGATGAATTACACCGTACAGGAAGCGTTAAAGCCCGT
AACGGTTGGCGATGCGCTCACCTACTGGCTTGAGTCTTACGTAAAGGAAAACCGCGTGGATTATATCGCCCTGAAAAGGC
GACTTAATAATCACGTAATACAGCAGATTGGTGCTATGCCGCTGGATAAATGCGAGCTACGGCACTGGCTGGCCTGTTTT
GACCAGGTGGCAAAGCGAACGCCTGTTACTGCCGGATTCGTGCTACAGGCGTGCAAACAGGCGCTTAAGTTCTGCCGTAG
GCGGCGCTATGCAATCAGCAACGTTCTGGACGATCTGAACGTGGCGGACGTTGGGAAAAAACCGGATATAAGCGAACGTG
TCTTAAGTAACAAAGAACTTGGCGAATTATTGCAGGCACTGGACAAAAAAATATTTTCCCCTTACTACGTCGCGTTAATC
CGCCTCCTGATTGTCTTCGGAGCCAGGACGGTAGAACTGAGGCTATCGGAGATCGGGGAGTGGGATTTTACGGAAATGCT
ATGGACCGTTCCGAAGGAGCACAGCAAAACGAAGGTCGCAATATTCCGGCCCATACCGGAAGCGATCCTGCCGTTCGTCA
CGCAGCTGGTGGAGCAGAACAGGCACACGGGCTTATTGCTGGGGGAAGCGAAACAGGAGGCCAGCGTATCGCAGTATGGA
AGATTAGCGCACAGGAGGCTTAATCATCCTCACTGGTCACTGCATGACATCCGGCGCACCTTTACAACCATGCTGAACGA
TTTAGGCGTTGATCCGCATGTCGTGGAGCAGCTTACAGGCCACCAGATGCCAGGAATGCAGCGAGTTTATAATCATTCCC
GTTATCTGGATGCTAAACGCAATGTGCTGGATATGTGGATGGAGCGGTTAGGGATACTGGCGGGAACACATGAAAACGTA
ACCACGCTACCAGTAGCCAGAAGAAAATAA

Upstream 100 bases:

>100_bases
GTGATTTTCCTTGTTCCAGCTTGTTTCACGTTGTAGCCCTTTGTGCAACGATCGGTGTAGTCACTGGTGTAGTCACTTTT
TCGTAAAGAGGGGGTAAAAC

Downstream 100 bases:

>100_bases
TTTTTTTCGTATTTTTTCAGTATGCGCATACTGGATATGCGAACAGATACAACGTGCAACAATGAGCAACAATGCGGAAC
AACTACGAACAAGAGGCGAA

Product: integrase of prophage

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Integrase; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage-Related Integrase; Prophage Integrase; Site-Specific Recombinase Phage Integrase Family Protein; DNA Integration/Recombination/Inversion Protein; Integrase Or Site-Specific Recombinase; Integrase Prophage; Integrase Of Prophage; Prophage CPS-53 Integrase; Integrase Protein; Bacteriophage P4-Like Integrase; Phage Family Integrase; Integrase I; Site-Specific Recombinase; CPS-53 Prophage; Phage Integrase-Like Protein; Cp4-Like Integrase Protein; Integrase Prophage Protein; Prophage CP4-Like Integrase; Bacteriophage Integrase; CP4-Like Integrase; Bacteriophage P4-Type Integrase; Integrase Phage Family; Phage Integrase Family Site-Specific Recombinase; Prophage P4 Integrase; Integrase/Recombinase Phage Integrase; Site Specific Integrase; Phage Integrase Family; Integrative Genetic Element

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSRAMNKLSDTLLRKLHGKPAEKNTFYSDGGNLSVKYLTSGKLTWYFTYRAGTGRETRPERIKLGSYPDLSLKAAREKAA
QCRTWLAEGKNPRHEMNYTVQEALKPVTVGDALTYWLESYVKENRVDYIALKRRLNNHVIQQIGAMPLDKCELRHWLACF
DQVAKRTPVTAGFVLQACKQALKFCRRRRYAISNVLDDLNVADVGKKPDISERVLSNKELGELLQALDKKIFSPYYVALI
RLLIVFGARTVELRLSEIGEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQNRHTGLLLGEAKQEASVSQYG
RLAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNVLDMWMERLGILAGTHENV
TTLPVARRK

Sequences:

>Translated_409_residues
MSRAMNKLSDTLLRKLHGKPAEKNTFYSDGGNLSVKYLTSGKLTWYFTYRAGTGRETRPERIKLGSYPDLSLKAAREKAA
QCRTWLAEGKNPRHEMNYTVQEALKPVTVGDALTYWLESYVKENRVDYIALKRRLNNHVIQQIGAMPLDKCELRHWLACF
DQVAKRTPVTAGFVLQACKQALKFCRRRRYAISNVLDDLNVADVGKKPDISERVLSNKELGELLQALDKKIFSPYYVALI
RLLIVFGARTVELRLSEIGEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQNRHTGLLLGEAKQEASVSQYG
RLAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNVLDMWMERLGILAGTHENV
TTLPVARRK
>Mature_408_residues
SRAMNKLSDTLLRKLHGKPAEKNTFYSDGGNLSVKYLTSGKLTWYFTYRAGTGRETRPERIKLGSYPDLSLKAAREKAAQ
CRTWLAEGKNPRHEMNYTVQEALKPVTVGDALTYWLESYVKENRVDYIALKRRLNNHVIQQIGAMPLDKCELRHWLACFD
QVAKRTPVTAGFVLQACKQALKFCRRRRYAISNVLDDLNVADVGKKPDISERVLSNKELGELLQALDKKIFSPYYVALIR
LLIVFGARTVELRLSEIGEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQNRHTGLLLGEAKQEASVSQYGR
LAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNVLDMWMERLGILAGTHENVT
TLPVARRK

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693166, Length=355, Percent_Identity=24.5070422535211, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47061; Mature: 46930

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAMNKLSDTLLRKLHGKPAEKNTFYSDGGNLSVKYLTSGKLTWYFTYRAGTGRETRPE
CCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCC
RIKLGSYPDLSLKAAREKAAQCRTWLAEGKNPRHEMNYTVQEALKPVTVGDALTYWLESY
CEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHH
VKENRVDYIALKRRLNNHVIQQIGAMPLDKCELRHWLACFDQVAKRTPVTAGFVLQACKQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALKFCRRRRYAISNVLDDLNVADVGKKPDISERVLSNKELGELLQALDKKIFSPYYVALI
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH
RLLIVFGARTVELRLSEIGEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQN
HHHHHHCCHHEEEEHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC
RHTGLLLGEAKQEASVSQYGRLAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTG
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHC
HQMPGMQRVYNHSRYLDAKRNVLDMWMERLGILAGTHENVTTLPVARRK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure 
SRAMNKLSDTLLRKLHGKPAEKNTFYSDGGNLSVKYLTSGKLTWYFTYRAGTGRETRPE
CHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCC
RIKLGSYPDLSLKAAREKAAQCRTWLAEGKNPRHEMNYTVQEALKPVTVGDALTYWLESY
CEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHH
VKENRVDYIALKRRLNNHVIQQIGAMPLDKCELRHWLACFDQVAKRTPVTAGFVLQACKQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALKFCRRRRYAISNVLDDLNVADVGKKPDISERVLSNKELGELLQALDKKIFSPYYVALI
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH
RLLIVFGARTVELRLSEIGEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQN
HHHHHHCCHHEEEEHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC
RHTGLLLGEAKQEASVSQYGRLAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTG
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHC
HQMPGMQRVYNHSRYLDAKRNVLDMWMERLGILAGTHENVTTLPVARRK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA