| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is dnaT [H]
Identifier: 218689490
GI number: 218689490
Start: 1710147
End: 1711193
Strand: Reverse
Name: dnaT [H]
Synonym: ECED1_1737
Alternate gene names: 218689490
Gene position: 1711193-1710147 (Counterclockwise)
Preceding gene: 218689491
Following gene: 218689489
Centisome position: 32.85
GC content: 54.73
Gene sequence:
>1047_bases GTGAGTATGGCTAATGCCTGGCTCAGATTGTGGCATGACATGCCAAATGATCCCAAATGGCGAACCATTGCCAGGGTCTC AGGACAGCCAATCGCAACAGTGATGGCGGTGTATATCCACCTTCTGGTGAGTGCGTCACGAAATGTCACGACATGTCACG GCGTGTCACTACGTGGTCACATTGATGTCACGACGGAAGATTTAGCAAGTGCGCTTGATGTGGCGGAAGACGTAATTGAT TCAATTTTGCATGCAATGCAGGGGCGGGTTCTGGATGGTGACCTTATTTCCGGATGGGAAAAACGTCAGGTGCTGAAAGA GGACAATGGTAACGTTTCGCAAACGGCAAAATCCCCGGCAGAGCGCAAGAGAGCGCAGCGGGAGCGCGAAAAGCTGCGGA AATATGATGCTGATTGTCACGATGAGTCACGACGTGTCACGCATCCGTCACGACAAGTCACGACAGATAAAGATACAGAT ACAGAATTAAACCCCACACATAACGCGCGCATGCGCGAGAGTGCTCCAACCGGTGAGTCGCATGGTGCGCCGTTGCAGAC AGCCGAACCTGAATACCTGGACGGCCTGAGCGAACCGATCGGGAAATTTTCGATGACTACTGTCTGGCAGCCGTCGTCGG ATTTTCGACAACGGGCAGCAGTGTGGGGTATGGCTCTGCCTGAGCCGGAATTTACACCTGCAGAGCTTGCCGCATTCCGG GATTACTGGATGGCGGAGGGGAAGGTTTTCACGCAGGTTCAGTGGGAGCAGAAATTTGCCCGCCACGTGCAGCACGTCAG GGCACAGGTAAAACCAGTCAGCAAGGGGGTAAACCATGCAGCAGCACCAGGTGGCACCGCATCACGGGCAGTTCAGGAAA TTCGGGCAGCACGTGAGCAGTGGGAACGTGAAAACGGATTTATCAGCGACGGAAACGGCCTGGAAGCTGTGGGAGCTTAT GGGGGAGGTGTATTCGAACCGCTGGACCCAGAAGAACGGGGCCGCACCTTCGAAGCTCTGGATTGCCCAGATTGGCGCGA TGACTGA
Upstream 100 bases:
>100_bases GTGGTGGTCAGCCTGGTAATGCTGTTGTCGTGCATTGACCAACAATATTCATGCCGGATTTCTTCCGGATGTTCGAGGGT AAAGTTCGGTATCAGATGAG
Downstream 100 bases:
>100_bases ACAGCAAATCCGGCTGGTCTGCCGTCAGTGCATGGACCGCTGCCGGGCGGGTGAAACGTGGCCCCCGGACCTGGCTGAGT TTGTTGCACTGATTTCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Primosomal protein I [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGHIDVTTEDLASALDVAEDVID SILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPAERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTD TELNPTHNARMRESAPTGESHGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGAY GGGVFEPLDPEERGRTFEALDCPDWRDD
Sequences:
>Translated_348_residues MSMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGHIDVTTEDLASALDVAEDVID SILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPAERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTD TELNPTHNARMRESAPTGESHGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGAY GGGVFEPLDPEERGRTFEALDCPDWRDD >Mature_347_residues SMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGHIDVTTEDLASALDVAEDVIDS ILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPAERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTDT ELNPTHNARMRESAPTGESHGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFRD YWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGAYG GGVFEPLDPEERGRTFEALDCPDWRDD
Specific function: This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dnaT family [H]
Homologues:
Organism=Escherichia coli, GI1790824, Length=73, Percent_Identity=56.1643835616438, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020917 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38918; Mature: 38786
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGH CCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEECE IDVTTEDLASALDVAEDVIDSILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPA EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCHH ERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTDTELNPTHNARMRESAPTGES HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC HGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQ HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH WERENGFISDGNGLEAVGAYGGGVFEPLDPEERGRTFEALDCPDWRDD HHHHCCCCCCCCCCEEHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCC >Mature Secondary Structure SMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGH CHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEECE IDVTTEDLASALDVAEDVIDSILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPA EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCHH ERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTDTELNPTHNARMRESAPTGES HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC HGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQ HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH WERENGFISDGNGLEAVGAYGGGVFEPLDPEERGRTFEALDCPDWRDD HHHHCCCCCCCCCCEEHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA