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The map label for this gene is yoqD [H]

Identifier: 218689474

GI number: 218689474

Start: 1697781

End: 1698476

Strand: Reverse

Name: yoqD [H]

Synonym: ECED1_1719

Alternate gene names: 218689474

Gene position: 1698476-1697781 (Counterclockwise)

Preceding gene: 218689475

Following gene: 218689473

Centisome position: 32.6

GC content: 47.13

Gene sequence:

>696_bases
ATGAAAGAGATGATTTCTGTCGATCATGAAATATCCATGAGTAGTCTGGATTTTCTGAATAACATTATTAATCCAGCCCG
GGCAGAAGCCGGAGAAGTCCCTCATGAACCGCGTAAGTTTCTTGCAAAAATTGAGGATGAGCTAGAGCTTGATGGAACCG
GAAAAAAATTCCGGTTAAACAATAACCAGACAAGAACGGCATACTATGATCTGGATTTTGACCAGATGATGCTCGTTGGC
ATGAGGGAGTCAAAGGCCGTTCGTCGTTCTGTGCTGGCAAGACTCAAAGCGATGCATGGTATTCAGATCCCCCGGACTTT
ACCTGAGGCGTTGCGATTTGCGGCAAAACTGGCTGAACAGAAAGCAGTGCTGGAAAATCAACTGGCAATAGCAGCGCCGA
AGGCTGAATTTGTTGATAACTATGTTGAAGCATCTGGTCTGATGGGATTCCGGGAAGTTGCTAAGTTACTCGGTATCAAA
GAAACCGATTTCCGGCTGTTTTTGTTGGAGAACGGAATAATGTATCGCCTCGCTGGAAAAATGACGCCTTACTCGCATCA
CCTGGATGCGGGGCGGTTTAGCGTGAAAACGGGCGAGACGGGCAATGGTCATGCTTTTACGCAGGTTAAATTCACCCCAA
AAGGTGTTGAGTGGATTGCTGGTCTGCTTGCTGCATGGAGAGCTACCGCAGCATGA

Upstream 100 bases:

>100_bases
TTTCAGGATGAGCCCTGGTGGATAACCGGCAGTGGTCTGGTTAACCCTCTTTGGGCTGGTTATTCCTGTGCGCAGGGTTC
ATCACTAAAAGGAATCAACC

Downstream 100 bases:

>100_bases
AGATGATAAAAATGGACTGGAAATTTTTGCTGGTCTGGCTGATTCCGTTTTTATGGGTGGTTGCCCAGTTAATTACTGCT
ATCAAGGGGTAAAGATGTCA

Product: putative antirepressor in prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKEMISVDHEISMSSLDFLNNIINPARAEAGEVPHEPRKFLAKIEDELELDGTGKKFRLNNNQTRTAYYDLDFDQMMLVG
MRESKAVRRSVLARLKAMHGIQIPRTLPEALRFAAKLAEQKAVLENQLAIAAPKAEFVDNYVEASGLMGFREVAKLLGIK
ETDFRLFLLENGIMYRLAGKMTPYSHHLDAGRFSVKTGETGNGHAFTQVKFTPKGVEWIAGLLAAWRATAA

Sequences:

>Translated_231_residues
MKEMISVDHEISMSSLDFLNNIINPARAEAGEVPHEPRKFLAKIEDELELDGTGKKFRLNNNQTRTAYYDLDFDQMMLVG
MRESKAVRRSVLARLKAMHGIQIPRTLPEALRFAAKLAEQKAVLENQLAIAAPKAEFVDNYVEASGLMGFREVAKLLGIK
ETDFRLFLLENGIMYRLAGKMTPYSHHLDAGRFSVKTGETGNGHAFTQVKFTPKGVEWIAGLLAAWRATAA
>Mature_231_residues
MKEMISVDHEISMSSLDFLNNIINPARAEAGEVPHEPRKFLAKIEDELELDGTGKKFRLNNNQTRTAYYDLDFDQMMLVG
MRESKAVRRSVLARLKAMHGIQIPRTLPEALRFAAKLAEQKAVLENQLAIAAPKAEFVDNYVEASGLMGFREVAKLLGIK
ETDFRLFLLENGIMYRLAGKMTPYSHHLDAGRFSVKTGETGNGHAFTQVKFTPKGVEWIAGLLAAWRATAA

Specific function: Unknown

COG id: COG3645

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005039
- InterPro:   IPR014054
- InterPro:   IPR019104 [H]

Pfam domain/function: PF03374 ANT; PF09669 Phage_pRha [H]

EC number: NA

Molecular weight: Translated: 25854; Mature: 25854

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEMISVDHEISMSSLDFLNNIINPARAEAGEVPHEPRKFLAKIEDELELDGTGKKFRLN
CCCHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCEEEEC
NNQTRTAYYDLDFDQMMLVGMRESKAVRRSVLARLKAMHGIQIPRTLPEALRFAAKLAEQ
CCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KAVLENQLAIAAPKAEFVDNYVEASGLMGFREVAKLLGIKETDFRLFLLENGIMYRLAGK
HHHHHHHHHEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEECC
MTPYSHHLDAGRFSVKTGETGNGHAFTQVKFTPKGVEWIAGLLAAWRATAA
CCCCHHCCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEMISVDHEISMSSLDFLNNIINPARAEAGEVPHEPRKFLAKIEDELELDGTGKKFRLN
CCCHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCEEEEC
NNQTRTAYYDLDFDQMMLVGMRESKAVRRSVLARLKAMHGIQIPRTLPEALRFAAKLAEQ
CCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KAVLENQLAIAAPKAEFVDNYVEASGLMGFREVAKLLGIKETDFRLFLLENGIMYRLAGK
HHHHHHHHHEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEECC
MTPYSHHLDAGRFSVKTGETGNGHAFTQVKFTPKGVEWIAGLLAAWRATAA
CCCCHHCCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]