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The map label for this gene is stfR [H]

Identifier: 218689439

GI number: 218689439

Start: 1668235

End: 1669716

Strand: Reverse

Name: stfR [H]

Synonym: ECED1_1681

Alternate gene names: 218689439

Gene position: 1669716-1668235 (Counterclockwise)

Preceding gene: 218689440

Following gene: 218689438

Centisome position: 32.05

GC content: 61.74

Gene sequence:

>1482_bases
ATGACAGTCAGAATATCGGGCGTGCTGAAGGACGGCACCGGGAAGCCGGTGCCGGGATGCACCATAGAGCTGAAAGCGCG
ACGCACCACAGAGACAGTGATAGTCACCACGGTGGCGCAGGGGCAGCCGGGGGAAACCGGCAGTTACAGTTTTGATGTGG
AGCCGGGGTGGTACCGGGTGACGCTGAACACGGAAGGGTACGCCCCGTCGTATGTGGGTGACATTCTGGTGAAGGCGGAT
TCTGAGCCGGGAACGCTGAATAAATTTCTGATGGAACAGGATGAGGCGCAGTATTACCCGAAAGCGCTTGCAGAGCTGGA
AGCGGTGGCAGCGGAAATCCTGAAGCGTGCTGAAGCGTCGGCGGCGAGTGCAGAGGAAGCGAAGAAACGGGCAGAGAATG
CCCGGGGACCGGCGGGCGAGAAGGGGGACACAGGTCCACAGGGTGCCACAGGGCCACAGGGACCAGCCGGGGCAACGGGG
GCGGTCGGACCAAAAGGTGAGCCGGGGCCAAAGGGAGAACGGGGAGAAACAGGTCCACAGGGACCGAAGGGCGATAAAGG
TGACCCGGGCGGACCGCCGGGGCCGAAAGGTGACACCGGCCCACGTGGAGAGGCCGGACCACCCGGACCACCCGGACCAC
AGGGTCCGGCAGGGCAAACCGGCCCGAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCTGCGGGTCCCGCAGGCAGT
GTCGCCAGTGTTCCGGATGCCAGCACATCACAGAAAGGTGTTGTACAGCTGAGCAGCGATACCAACAGCGATGATGAAAC
AAAAGCGGCAACCCCAAAGGCTGTGAAAGCGGTAATGGCAGAAGTGCAGGCAGCAAAAACGAAGGCAGAAGAGGCAGCAA
CCCGGGCAGCAGTCCCCGGACCGAAGGGGGACAGGGGGGAACCTGGCGCACCTGGTGCAGTGGGGCCCGCAGGCCCACGG
GGACCGGCTGGTGCAGCTGGTCCCAAAGGTGATGCAGGCCCCGCAGGAAAGGATGGTACCGCCGGAGCGGAAGGTAAGGC
AGGTCCGGCAGGGCCACGAGGTGAAAGGGGACCAGCGGGGGCGCAGGGTGTTCCGGGGCCACGGGGCCCTGCCGGAGGGC
GAGGGCCGATGGGACCGCCCGGGTTGGATGGTAAAACCGGACCACAGGGACCACAGGGACCACAAGGGCCAACCGGAAGG
CTGGTACCCGGGGAAATTTACAGCATCGGAACATACATTATTGCCGCACTAGGCCCGTATATAACCGACATCGGCAGAAC
CTATCAGCCAGGAGAAACTGTATCGGGTTCACGCCTTAAGCGATGCGCCCTAATCAAAGACGAAAACGGAAACTATATGA
AAGCTAACACCGATGGCATTGACGGCAACCTATCCTCAGTTCCGGGGTCATGGATGGTGTGTAATGAAATTACGTCGACA
AATGACAATGAAGGCATCGGGCTGTTCCAGCGCGCATACTGA

Upstream 100 bases:

>100_bases
CTTTGACTGACGGCACCCTTTAACACCAGCCAGTCACAATTTATACCCCTGATCGCAGACCGGGTAACCGGTACTGCGGT
TTTTTTTATGGGAGAAATCT

Downstream 100 bases:

>100_bases
CAGACAGGAGATGAACATGAATGTGGAAAAAAATAAGCAATCCGCAATGGGCAGATAAAGAGCACACTGCTGTCAATTGC
ATGGTGAAGTTTGAGCACAT

Product: putative tail fiber protein from prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKAD
SEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGPQGPAGATG
AVGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGS
VASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPGAPGAVGPAGPR
GPAGAAGPKGDAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPRGPAGGRGPMGPPGLDGKTGPQGPQGPQGPTGR
LVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITST
NDNEGIGLFQRAY

Sequences:

>Translated_493_residues
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKAD
SEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGPQGPAGATG
AVGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGS
VASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPGAPGAVGPAGPR
GPAGAAGPKGDAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPRGPAGGRGPMGPPGLDGKTGPQGPQGPQGPTGR
LVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITST
NDNEGIGLFQRAY
>Mature_492_residues
TVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKADS
EPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGPQGPAGATGA
VGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGSV
ASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRG
PAGAAGPKGDAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPRGPAGGRGPMGPPGLDGKTGPQGPQGPQGPTGRL
VPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITSTN
DNEGIGLFQRAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI183583553, Length=280, Percent_Identity=36.7857142857143, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI115392133, Length=305, Percent_Identity=36.0655737704918, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4502961, Length=262, Percent_Identity=39.3129770992366, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI5803080, Length=300, Percent_Identity=37, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI89363017, Length=322, Percent_Identity=37.5776397515528, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI115527070, Length=394, Percent_Identity=31.7258883248731, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI156616290, Length=292, Percent_Identity=33.9041095890411, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI56847616, Length=118, Percent_Identity=51.6949152542373, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI110735435, Length=305, Percent_Identity=36.3934426229508, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI115527066, Length=394, Percent_Identity=31.7258883248731, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI115527062, Length=304, Percent_Identity=34.5394736842105, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI48762934, Length=233, Percent_Identity=39.4849785407725, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI65301115, Length=231, Percent_Identity=32.9004329004329, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI119829187, Length=256, Percent_Identity=36.71875, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4502951, Length=303, Percent_Identity=38.2838283828383, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI122937273, Length=359, Percent_Identity=30.08356545961, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI18780273, Length=273, Percent_Identity=36.6300366300366, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI111118976, Length=315, Percent_Identity=37.7777777777778, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI38570073, Length=335, Percent_Identity=33.7313432835821, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI154759255, Length=295, Percent_Identity=32.2033898305085, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI148536825, Length=288, Percent_Identity=35.7638888888889, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI32140760, Length=297, Percent_Identity=34.3434343434343, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI38570075, Length=332, Percent_Identity=34.0361445783133, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI18105016, Length=99, Percent_Identity=50.5050505050505, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI111118974, Length=315, Percent_Identity=37.7777777777778, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI18105018, Length=99, Percent_Identity=50.5050505050505, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI29725624, Length=317, Percent_Identity=32.4921135646688, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI111118970, Length=312, Percent_Identity=36.8589743589744, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI73486666, Length=292, Percent_Identity=33.5616438356164, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI291045255, Length=284, Percent_Identity=38.0281690140845, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI145701009, Length=99, Percent_Identity=50.5050505050505, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI111118968, Length=312, Percent_Identity=36.8589743589744, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI111118972, Length=312, Percent_Identity=36.8589743589744, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI47778921, Length=396, Percent_Identity=31.5656565656566, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=53.6585365853659, Blast_Score=129, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI71992048, Length=302, Percent_Identity=38.0794701986755, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17569903, Length=100, Percent_Identity=50, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24581820, Length=309, Percent_Identity=38.1877022653722, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24581822, Length=309, Percent_Identity=38.1877022653722, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24581824, Length=309, Percent_Identity=38.1877022653722, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17137252, Length=263, Percent_Identity=37.2623574144487, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221379525, Length=215, Percent_Identity=37.2093023255814, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221379533, Length=215, Percent_Identity=37.2093023255814, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 48732; Mature: 48601

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEE
TLNTEGYAPSYVGDILVKADSEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEAS
EECCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASAEEAKKRAENARGPAGEKGDTGPQGATGPQGPAGATGAVGPKGEPGPKGERGETGPQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDKGDPGGPPGPKGDTGPRGEAGPPGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPG
CCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGKDGTAGAEGKAGPAGPRGERGPAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQGVPGPRGPAGGRGPMGPPGLDGKTGPQGPQGPQGPTGRLVPGEIYSIGTYIIAALGPY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITST
HHHHCCCCCCCCCCCCHHHEEEEEEECCCCCEEEECCCCCCCCHHCCCCCEEEECCCCCC
NDNEGIGLFQRAY
CCCCCCCHHHHCC
>Mature Secondary Structure 
TVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRV
EEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEE
TLNTEGYAPSYVGDILVKADSEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEAS
EECCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASAEEAKKRAENARGPAGEKGDTGPQGATGPQGPAGATGAVGPKGEPGPKGERGETGPQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDKGDPGGPPGPKGDTGPRGEAGPPGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPG
CCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGKDGTAGAEGKAGPAGPRGERGPAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQGVPGPRGPAGGRGPMGPPGLDGKTGPQGPQGPQGPTGRLVPGEIYSIGTYIIAALGPY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITST
HHHHCCCCCCCCCCCCHHHEEEEEEECCCCCEEEECCCCCCCCHHCCCCCEEEECCCCCC
NDNEGIGLFQRAY
CCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]