| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is eibA [H]
Identifier: 218689437
GI number: 218689437
Start: 1665770
End: 1666954
Strand: Reverse
Name: eibA [H]
Synonym: ECED1_1678
Alternate gene names: 218689437
Gene position: 1666954-1665770 (Counterclockwise)
Preceding gene: 218689438
Following gene: 218689436
Centisome position: 32.0
GC content: 49.37
Gene sequence:
>1185_bases ATGAGCAAGAAGTTTACAAAGGCTGTTTTGTCTGCGGCAGTTTTTTCAGCGCTGTTTGTTCCTTGTGTATCGTTTGCACA GGATACACAGGATGCTACGGGGGATTATTCTGCGCTAAAAACGGAAAACGGTAATTCAGGTTCTATGTATGGGATATATT TTGATGGTGCTACAAAAACGGCTTATATAAAATGGGGGCAGGACGGAAGTATAGCATCGCAGAGGGGGGAAACGATTCAG GCGCTAAGTAAAATAGATGTCAATGGTAATGTTACAATTACCTCTGCGGATGGTTCGACAACATTTACTGTTTATGATAA AGAGCTTCATGATTTTATGAAGACTGCGGCATCAGGGAAAGATAAACTGTTGGCGCGTAAGAATGATGGAGTTTTTCTGA CAGAACAGAATATCCGTGACCTGTACAACCGCGTTTCAGCAATCCAGCAGATGAAAACCAACGTCGGCCTGGATAAGTAT GGAAATGTGGCAGCAGATCCGAGTGAAATAGAAGAACACATGTCTTTACAGCGCTATCTGGCAGGGGAGGCCGCCCACTC CACCATTGTTGCGAATGAGCTTGATGCTCAGAAAGGCGAGCTTGAAGCGCAGAAGCAAAATCTTGGTAAACTGACCACGC GTACCGACAAGATTGATGCTGCGGCTGCTGCAACAGCTGCAAAAGTCGAATCCCGCACACTGGTTGGTGTGAGTTCTGAT GGCACCCTGACCCGTGCAGAAGGTGCAAAGAACACCATTTCTGTTAACGATGGTCTGGTGGCCCTGTCTGGTCGTACTGA CCGTATTGATGCAGCAGTTGGTGCCATTGATGGCCGTGTCACCCGTAACACGCAATCCATTGAGAAAAACAGCAAGGCGA TTGCAGCCAATACCCGTACGCTGCAGCAACATTCAGCACGTCTGGACAGCCAGCAGCGCCAGATTAATGAAAACCACAAG GAAATGAAGCGTGCAGCAGCACAGTCTGCGGCCCTGACAGGTCTGTTCCAGCCGTACAGTGTGGGTAAATTCAACGCCAC GGCAGCGGTTGGTGGTTACAGCGACCAGCAGGCACTGGCGGTGGGTGTGGGTTACCGCTTCAACGAGCAGACCGCAGCGA AAGCAGGCGTGGCATTCAGTGATGGCGATGCCTCCTGGAACGTTGGTGTGAACTTCGAGTTTTAA
Upstream 100 bases:
>100_bases AGGAGTAAGCTCATGAGAGCGGCGAGACATCAGATTTTCTTTATATATCCGATGTTGAACTGTTTTATTTGTATACAGAT AATTTTATAGGGTATACCAC
Downstream 100 bases:
>100_bases TTGCTGAAGGTGACATGAAGTATGACGGCAGGCGCAGGACTCTGGTCTGCCGTTTTTCATGGGGCATAAAAACAGGAAGG TGCTGCGATGAAGGTAATTC
Product: Immunoglobulin-binding protein from phage origin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSKKFTKAVLSAAVFSALFVPCVSFAQDTQDATGDYSALKTENGNSGSMYGIYFDGATKTAYIKWGQDGSIASQRGETIQ ALSKIDVNGNVTITSADGSTTFTVYDKELHDFMKTAASGKDKLLARKNDGVFLTEQNIRDLYNRVSAIQQMKTNVGLDKY GNVAADPSEIEEHMSLQRYLAGEAAHSTIVANELDAQKGELEAQKQNLGKLTTRTDKIDAAAAATAAKVESRTLVGVSSD GTLTRAEGAKNTISVNDGLVALSGRTDRIDAAVGAIDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHK EMKRAAAQSAALTGLFQPYSVGKFNATAAVGGYSDQQALAVGVGYRFNEQTAAKAGVAFSDGDASWNVGVNFEF
Sequences:
>Translated_394_residues MSKKFTKAVLSAAVFSALFVPCVSFAQDTQDATGDYSALKTENGNSGSMYGIYFDGATKTAYIKWGQDGSIASQRGETIQ ALSKIDVNGNVTITSADGSTTFTVYDKELHDFMKTAASGKDKLLARKNDGVFLTEQNIRDLYNRVSAIQQMKTNVGLDKY GNVAADPSEIEEHMSLQRYLAGEAAHSTIVANELDAQKGELEAQKQNLGKLTTRTDKIDAAAAATAAKVESRTLVGVSSD GTLTRAEGAKNTISVNDGLVALSGRTDRIDAAVGAIDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHK EMKRAAAQSAALTGLFQPYSVGKFNATAAVGGYSDQQALAVGVGYRFNEQTAAKAGVAFSDGDASWNVGVNFEF >Mature_393_residues SKKFTKAVLSAAVFSALFVPCVSFAQDTQDATGDYSALKTENGNSGSMYGIYFDGATKTAYIKWGQDGSIASQRGETIQA LSKIDVNGNVTITSADGSTTFTVYDKELHDFMKTAASGKDKLLARKNDGVFLTEQNIRDLYNRVSAIQQMKTNVGLDKYG NVAADPSEIEEHMSLQRYLAGEAAHSTIVANELDAQKGELEAQKQNLGKLTTRTDKIDAAAAATAAKVESRTLVGVSSDG TLTRAEGAKNTISVNDGLVALSGRTDRIDAAVGAIDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKE MKRAAAQSAALTGLFQPYSVGKFNATAAVGGYSDQQALAVGVGYRFNEQTAAKAGVAFSDGDASWNVGVNFEF
Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes attachment to eukaryotic cells and after invasion, is the major adhesin in infected tissue. Constitutes an alternative uptake pathway under conditio
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008640 - InterPro: IPR008635 - InterPro: IPR008126 - InterPro: IPR005594 [H]
Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]
EC number: NA
Molecular weight: Translated: 42003; Mature: 41872
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKFTKAVLSAAVFSALFVPCVSFAQDTQDATGDYSALKTENGNSGSMYGIYFDGATKT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCEE AYIKWGQDGSIASQRGETIQALSKIDVNGNVTITSADGSTTFTVYDKELHDFMKTAASGK EEEEECCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCC DKLLARKNDGVFLTEQNIRDLYNRVSAIQQMKTNVGLDKYGNVAADPSEIEEHMSLQRYL HHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH AGEAAHSTIVANELDAQKGELEAQKQNLGKLTTRTDKIDAAAAATAAKVESRTLVGVSSD HCHHHHHEEEEHHCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCEEEEEECCC GTLTRAEGAKNTISVNDGLVALSGRTDRIDAAVGAIDGRVTRNTQSIEKNSKAIAANTRT CCEEECCCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCEECCHHHHHHCCCEEEECHHH LQQHSARLDSQQRQINENHKEMKRAAAQSAALTGLFQPYSVGKFNATAAVGGYSDQQALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEE VGVGYRFNEQTAAKAGVAFSDGDASWNVGVNFEF EECCCEECCHHHHHCCCEEECCCCCEEEEEEECC >Mature Secondary Structure SKKFTKAVLSAAVFSALFVPCVSFAQDTQDATGDYSALKTENGNSGSMYGIYFDGATKT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCEE AYIKWGQDGSIASQRGETIQALSKIDVNGNVTITSADGSTTFTVYDKELHDFMKTAASGK EEEEECCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCC DKLLARKNDGVFLTEQNIRDLYNRVSAIQQMKTNVGLDKYGNVAADPSEIEEHMSLQRYL HHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH AGEAAHSTIVANELDAQKGELEAQKQNLGKLTTRTDKIDAAAAATAAKVESRTLVGVSSD HCHHHHHEEEEHHCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCEEEEEECCC GTLTRAEGAKNTISVNDGLVALSGRTDRIDAAVGAIDGRVTRNTQSIEKNSKAIAANTRT CCEEECCCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCEECCHHHHHHCCCEEEECHHH LQQHSARLDSQQRQINENHKEMKRAAAQSAALTGLFQPYSVGKFNATAAVGGYSDQQALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEE VGVGYRFNEQTAAKAGVAFSDGDASWNVGVNFEF EECCCEECCHHHHHCCCEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3043229; 2761389; 2592347; 1548243; 12183532 [H]