Click here to switch to the map view.

The map label for this gene is yncA [H]

Identifier: 218689376

GI number: 218689376

Start: 1582587

End: 1583105

Strand: Reverse

Name: yncA [H]

Synonym: ECED1_1602

Alternate gene names: 218689376

Gene position: 1583105-1582587 (Counterclockwise)

Preceding gene: 218689378

Following gene: 218689375

Centisome position: 30.39

GC content: 53.37

Gene sequence:

>519_bases
ATGTCCATCCGTTTTGCCCGCAAAGCCGACTGTGCTGCAATTGCGGAAATTTATAACCACGCCGTGTTGTATACGGCGGC
TATCTGGAATGACCAAACGGTGGATGCGGATAACCGCATTGCCTGGTTTGAAGCGCGGACCATAGCAGGTTATCCGGTGC
TGGTGAGTGAAGAAGATGGCGTAGTGACGGGATATGCCTCGTTTGGCGACTGGCGTAGTTTTGATGGTTTTCGCCATACC
GTGGAACATTCGGTTTATGTCCATCCCGATCATCAGGGGAAAGGTCTGGGGCGTAAATTGTTAAGCCGATTGATTGATGA
AGCGCGGGATTGCGGGAAGCATGTCATGGTCGCCGGGATCGAATCGCAAAATCAGGCCTCGCTGCATCTGCACCAGTCGC
TGGGATTTGTCGTCACCGCGCAAATGCCGCAGGTAGGTACTAAATTTGGGCGCTGGCTGGATCTGACATTTATGCAGTTG
CAACTCGACGAGCGCACTGAACCGGACGCGATCGGATGA

Upstream 100 bases:

>100_bases
CCCTCTGCAACACGCAATAATTTCATAGAGGAATCCGTTGCTTCGGGCTGTTTTCGATAGTATTGATAACATCATCATCA
TTATTTTATCGAGGCCAGAC

Downstream 100 bases:

>100_bases
ATCAGTCACTTACCCTTGCCTTTTTGATTGCAGCCGGGATTGGTCTGGTAGTCCAGAACACGCTGATGGTGCGCATCACC
CAGACCTCCTCTACCATTCT

Product: putative acyl-CoA N-acyltransferase domain-containing acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHT
VEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQL
QLDERTEPDAIG

Sequences:

>Translated_172_residues
MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHT
VEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQL
QLDERTEPDAIG
>Mature_171_residues
SIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTV
EHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQ
LDERTEPDAIG

Specific function: Unknown

COG id: COG1247

COG function: function code M; Sortase and related acyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787719, Length=172, Percent_Identity=98.8372093023256, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 19249; Mature: 19118

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDG
CCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCEECCCCEEEEEEEEEECCCEEEEECCCC
VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGI
EEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
ESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG
CCCCCCEEEEECCCCEEEEECCCHHHHHHCCCCEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDG
CCCCCCCCHHHHHHHHHCCEEEEEEEECCCCEECCCCEEEEEEEEEECCCEEEEECCCC
VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGI
EEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
ESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG
CCCCCCEEEEECCCCEEEEECCCHHHHHHCCCCEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]