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The map label for this gene is ydcK [H]

Identifier: 218689359

GI number: 218689359

Start: 1565918

End: 1566898

Strand: Reverse

Name: ydcK [H]

Synonym: ECED1_1584

Alternate gene names: 218689359

Gene position: 1566898-1565918 (Counterclockwise)

Preceding gene: 218689363

Following gene: 218689356

Centisome position: 30.08

GC content: 48.11

Gene sequence:

>981_bases
ATGCGTAAATATCGTCTAAGTGAAGAACAGCGAGCCTTTAGTTATCAGGAAGATGGCACTAAAAAAAGTGTGTTATTACG
GCAAATTATCGCCATGAGCGATTTTAACGATGTGATAGCAGGAAGCGCTGGCGGCTGGATCGATCACGAAACGGTGTTAG
CACAGGAAGGAAATTGCTGGATTTACGACCAGAATGCTATTGCGTTCGGCGGAACGGTGATTTCCGGGAATACGCGTATC
ACCGGCACCAGCGTGCTGTGGGGAGAGGTTTACGCAACGGATAATGTCTGGATCGATAATAGTGAAATCAGCCAGGGTGC
ATATATAAGTGACAGTGTCACCATTCGTGACTCATTAGTTTGTGGTCAATGTAGAATATTTGGTCACGCCTTAATTGATC
AACATTCTATGATCGTCGCCGCACAAGGCTTAACGCCCGACCATCAACTCCTGCTACAAATTTATGATCGCGCAAAGGTT
AGCGCCTCGCGTATTGTCCACCAGGCACAAATTTATGGCGATGCCGTCGCCCGGTATGCTTTTATTGAACATCGCGCCGA
AGTTTTTGATTTTGCCAGCGTTGAAGGTAATGAAGAGAACAACGTCTGGCTATGCGATTGCGCTAAAGTCTACGGTCACG
CGCAGGTGAAAGCTGGCATAGAAGAAGATGCCATTCCGACGATTCATTACAGTTCGCAGGTGGCGGAATATGCCATTGTG
GAAGGTAATTGTGTGTTAAAACATCATGTCTTGATTGGCGGAAATGCCGTGGTATGCGGCGGACCGATTCTGCTCGACGA
GCACGTTGTCATACAAGGTGAGAGCCGTATTACTGGTGCGGTGATAATTGAAAACCATGTGGAGTTAACCGACCACGCCG
TCGTTGAAGCCTTTGATGGCGACACGGTTCATGTCCGTGGTCCAAAAGTCATTAACGGCGAGGAGCGCATTACTCGAACG
CCGTTGGCAGGGTTATTGTGA

Upstream 100 bases:

>100_bases
TATAAAGTATATTTGAAATGCATTTTATGGAATTTTCTCGAGCATAGCCAGAGCCGCAGAATTTGCTACGGTTATAGTAA
GTCACCTGTGGGAAAACGCT

Downstream 100 bases:

>100_bases
ATCGATAATACGCGCGTATAAGTTCACATCATCATAGGCATCATTCAGGAACTCAGCCTGTTTCAGGCAACCTTCAAGGA
TAAAACCATTGCGCAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAMSDFNDVIAGSAGGWIDHETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIRDSLVCGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRAKV
SASRIVHQAQIYGDAVARYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Sequences:

>Translated_326_residues
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAMSDFNDVIAGSAGGWIDHETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIRDSLVCGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRAKV
SASRIVHQAQIYGDAVARYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL
>Mature_326_residues
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAMSDFNDVIAGSAGGWIDHETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIRDSLVCGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRAKV
SASRIVHQAQIYGDAVARYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=96.319018404908, Blast_Score=643, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35688; Mature: 35688

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAMSDFNDVIAGSAGGWIDHETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIRDSLV
EEECCEEEECCEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEECCEE
CGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRAKVSASRIVHQAQIYGDAVARYA
ECHHHEEHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHHEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCEEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC
>Mature Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAMSDFNDVIAGSAGGWIDHETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIRDSLV
EEECCEEEECCEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEECCEE
CGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRAKVSASRIVHQAQIYGDAVARYA
ECHHHEEHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHHEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCEEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]