| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yciQ [H]
Identifier: 218689258
GI number: 218689258
Start: 1445087
End: 1446979
Strand: Direct
Name: yciQ [H]
Synonym: ECED1_1474
Alternate gene names: 218689258
Gene position: 1445087-1446979 (Clockwise)
Preceding gene: 218689257
Following gene: 218689259
Centisome position: 27.74
GC content: 46.86
Gene sequence:
>1893_bases ATGATGGCAGGGATATATCGCTGCATTTTGCTGTTGATAGTTGGGCTTTTTTTCTCTTCGTTGAGTTATGCGAAAAACAC GGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCGAATGGGGTGCTCGACATCA AAGAGAACATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGATTTTATCGTGATTTACCGCGACTCTGGATGCAG CCTGATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGA CTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTC ATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCG TTTGAAATTTATAAGACCCTATTTTCACTCAAGTTGCCTGATATTGCGGGTAATCCATTTAGCGAAATCGATCTCTTTAC TGGAGAAGAGGGCGACACATATCGAAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCTCGCGATCCGTTTTATCGTG AAGATTTCACGGTCCTCTACCGCTGGCCTCACGCATTACTTGGTAATGCCCCGGCTCCACAAACGACGAATATTTTCAGT CATCTTCTTTTACCCTCTATGTCATCGTTGTTAATTTGCTTTCCGAGTCTGTTCCTGGCGTGTGGATGGTTATATCTCTG GAAGCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACGCCCGGCATGTTAC GTCTTGATGCGAAACTGGTTTACGACGATAAAGGTTTTTGCGCCGATATCGTAAATCTGATTGTGAAAGGAAAAATTCAT CTGGAAGATCATTATGACAAGAACCAGCAAATCCTGATTCGTGTTAATGAAGGCGCGACCAGAAATAATGCGGTATTACT GCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTGCTTACGGGGAGACGCAACAGAGTCT TACGCAAGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGACCTGATGCGTTTTTG CAATGGGGCGGAATGGCAATATTGGCGGTCATTCTCTACGGTAACCTGAGTCCCGTAGGCTGGGCAGGAATGAGTCTGGT AGGCGATATGTTTATTATGATCTGCTGGCTTCTTACTTTCTTATTTTGTTCCCTTGATCTTTTGTTTGCCCGCGATGATG ACAAGCCTTGCGTTAATCGTGTCATCATCACTTTGTTTTTACCACTGATTTGTTCAGGTGTGGCTTTTTACTCTCTCTAC ATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTAGCGCGGTTTTCCTGACCGGTTATCTCAC TGGCATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACT ATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGGCGGCGGAGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGTTA GGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATCGCCCCTTCGCTTTCTTCGGCGATTTGCGCTCC AGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTGAGTTGCGGGGTCTATACCAGTTTGTTGGGGCGGA GCTATTCTGGTGGTGGTTCTGGCGCTGGTGGCGGAGGCGGTGGTGGCTGGTAA
Upstream 100 bases:
>100_bases AACGGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAA TTGCGTTCCACGGATGGAAA
Downstream 100 bases:
>100_bases TCAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCAAGTTAAAA CGTCGAGTCGTTTACTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MMAGIYRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPNGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQ PDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWP FEIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFS HLLLPSMSSLLICFPSLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIH LEDHYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRKAFLRMQKFYLPRKKSSFYRPDAFL QWGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLTFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLY INVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALL GWAISANLGREWALRIAPSLSSAICAPEIARNGVLFSLQTHLSCGVYTSLLGRSYSGGGSGAGGGGGGGW
Sequences:
>Translated_630_residues MMAGIYRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPNGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQ PDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWP FEIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFS HLLLPSMSSLLICFPSLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIH LEDHYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRKAFLRMQKFYLPRKKSSFYRPDAFL QWGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLTFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLY INVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALL GWAISANLGREWALRIAPSLSSAICAPEIARNGVLFSLQTHLSCGVYTSLLGRSYSGGGSGAGGGGGGGW >Mature_630_residues MMAGIYRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPNGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQ PDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWP FEIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFS HLLLPSMSSLLICFPSLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIH LEDHYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRKAFLRMQKFYLPRKKSSFYRPDAFL QWGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLTFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLY INVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALL GWAISANLGREWALRIAPSLSSAICAPEIARNGVLFSLQTHLSCGVYTSLLGRSYSGGGSGAGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=615, Percent_Identity=94.7967479674797, Blast_Score=1176, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 71314; Mature: 71314
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAGIYRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPNGVLDIKENIHFQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEEECCCCEEE ARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDK ECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCH QRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPF HHCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC SEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFS CCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHH HLLLPSMSSLLICFPSLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEEE YDDKGFCADIVNLIVKGKIHLEDHYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRK ECCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHHCC GDKVVLTGRRNRVLRKAFLRMQKFYLPRKKSSFYRPDAFLQWGGMAILAVILYGNLSPVG CCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCC WAGMSLVGDMFIMICWLLTFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLY HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEE INVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEA EECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAICAPEIARNGVLFSLQT HHCCCCCCCCCCCCCCHHHEEEHHCCCCCCEEEEEECCCHHHHHCCHHHHCCCEEEEEEH HLSCGVYTSLLGRSYSGGGSGAGGGGGGGW HCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMAGIYRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPNGVLDIKENIHFQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEEECCCCEEE ARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDK ECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCH QRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPF HHCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC SEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFS CCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHH HLLLPSMSSLLICFPSLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEEE YDDKGFCADIVNLIVKGKIHLEDHYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRK ECCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHHCC GDKVVLTGRRNRVLRKAFLRMQKFYLPRKKSSFYRPDAFLQWGGMAILAVILYGNLSPVG CCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCC WAGMSLVGDMFIMICWLLTFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLY HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEE INVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEA EECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAICAPEIARNGVLFSLQT HHCCCCCCCCCCCCCCHHHEEEHHCCCCCCEEEEEECCCHHHHHCCHHHHCCCEEEEEEH HLSCGVYTSLLGRSYSGGGSGAGGGGGGGW HCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]