Definition Escherichia coli ED1a chromosome, complete genome.
Accession NC_011745
Length 5,209,548

Click here to switch to the map view.

The map label for this gene is 218689231

Identifier: 218689231

GI number: 218689231

Start: 1417801

End: 1419165

Strand: Direct

Name: 218689231

Synonym: ECED1_1445

Alternate gene names: NA

Gene position: 1417801-1419165 (Clockwise)

Preceding gene: 218689230

Following gene: 218689232

Centisome position: 27.22

GC content: 55.6

Gene sequence:

>1365_bases
ATGTGGAACCTTTTACGGCGAACCCGAAAAAACCAGAAATCAGGACGTGACGTAAGAGAGGCGGGCTGGACCAGCCTGTT
TCAGGCGGTGGCTGAGCCCTTTGCCGGTGCCTGGCAGCAGGGCGTGAAAACCGATCCGGAAAGTGTCCTCTCCTTTCATG
CGGTGTTTTCGTGCATTTCGCTGATATCCCAGGATATCGCCAAAATGCGGCTGCGTCTTATGCAGACGGATGCGCATGGG
ATACGCAGGGAAACGCGCCGGGGGGATATTGCCCGCCTCTGTCGTCGTCCCAACGCCCAGCAGAACCGCATCCAGTTTTT
TGAACTGTGGCTGAACGCCAAACTGCGTCACGGCAATACGGTGGTGCTGAAAATCCGTAATGCCCGGGGGCAGATCAAAG
AACTGCGTATTCTGGACTGGAGCCGGGTTGAACCTCTGGTGGCGGATGACGGCGAGGTGTTCTACCGCATCACGCCGGAC
CGGAACTGTGGGATCACTGAGGCGGTGACGGTGCCTGCCCGGGAAGTGATCCACGACCGGTTTAACTGTTTTTTTCATCC
GCTTATAGGATTGCCGCCGGTGTATGCCGCCGGGCTGGCGGCCATGCAGGGGCATCATATTCAGGAAAATTCGACGTCTT
TTTTCAGAAATGGCGGCAGGCCGTCCGGGGTGATTGAGATCCCCGGCAGTATTACGGAAGAAAATGCGAAAAAACTGAAG
AGCAACTGGGACAGCGGGTATACAGGCGAAAATGCGGGTAAAACGGCCATTCTGAGCAACGGGGCAAAATACAACCCCAC
GACGTTTTCACCGGTGGATGCGCAGACGGTGGAACAACTGAAGATGACCGCTGAAATTGTCTGTTCGGTGTTCCGTGTCC
CGGCCTACAAGATTGGCGTGGGACAACCGCCTTCCAGTGACAACGTGGAGGCGCTGGAGCAGCAGTATTATTCCCAGTGC
CTGCAGACGCTGATTGAGTCCATTGAACTGTTACTGGATGAGGCGCTGGAAACGGGAGAAAACGAGAGTACAGAATTTGA
TGTCACCACGCTGCTGAGAATGGACAGTGAGCGGCGCATGAAAACGCTGGGGGATGCGGTGAAAAATACGCTTCTCACGC
CCAATGAGGCCCGTAAACGGGAGAACCTGCCGCCTCTTGCGGGAGGTGACGCACTGTATCTTCAGCAGCAGAACTACAGT
CTGGAGGCGCTGTCCCGTCGTGATGCCCGTGAAGATCCGTTCGCGTCGTCCGGGAAAAGAGTTTCAGCCGAGCTGCCTGA
CGGCGCATCTGACGGTAATAAGGCAATCAGTGAAACAGAGCATGATGTGGTGAAGGCGATGTTCAGGGGGATACTGAAAA
AATGA

Upstream 100 bases:

>100_bases
AGCCGTGTGCGGAGGTGCTGGTTCGCCTGGGAAAGGCGGAGTACATCACGGTGCGACGTCCGGCAGGTCAGAAAAAGAAA
CGTGATGCGGAGCATGGCGA

Downstream 100 bases:

>100_bases
ATGAACGTGAACTGTCCATTATCCGTGCACTGGGCGAAGAATTCGCCGCGGTGATAACGGATTTACAGCGTACATTTGAA
GAAAAGATGGCTGCGCAGGC

Product: phage portal protein, HK97 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKTDPESVLSFHAVFSCISLISQDIAKMRLRLMQTDAHG
IRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWSRVEPLVADDGEVFYRITPD
RNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAAMQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK
SNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQC
LQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYS
LEALSRRDAREDPFASSGKRVSAELPDGASDGNKAISETEHDVVKAMFRGILKK

Sequences:

>Translated_454_residues
MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKTDPESVLSFHAVFSCISLISQDIAKMRLRLMQTDAHG
IRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWSRVEPLVADDGEVFYRITPD
RNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAAMQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK
SNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQC
LQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYS
LEALSRRDAREDPFASSGKRVSAELPDGASDGNKAISETEHDVVKAMFRGILKK
>Mature_454_residues
MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKTDPESVLSFHAVFSCISLISQDIAKMRLRLMQTDAHG
IRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWSRVEPLVADDGEVFYRITPD
RNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAAMQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK
SNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQC
LQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYS
LEALSRRDAREDPFASSGKRVSAELPDGASDGNKAISETEHDVVKAMFRGILKK

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 50804; Mature: 50804

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKTDPESVLSFHAVFSCIS
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LISQDIAKMRLRLMQTDAHGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCEEECCCE
VVLKIRNARGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDR
EEEEEECCCCCHHHHEEECHHHCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
FNCFFHPLIGLPPVYAAGLAAMQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHH
SNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGV
HCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECC
GQPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHH
KTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASSGKR
HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCE
VSAELPDGASDGNKAISETEHDVVKAMFRGILKK
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKTDPESVLSFHAVFSCIS
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LISQDIAKMRLRLMQTDAHGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCEEECCCE
VVLKIRNARGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDR
EEEEEECCCCCHHHHEEECHHHCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
FNCFFHPLIGLPPVYAAGLAAMQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHH
SNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGV
HCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECC
GQPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHH
KTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASSGKR
HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCE
VSAELPDGASDGNKAISETEHDVVKAMFRGILKK
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA