| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218688670
Identifier: 218688670
GI number: 218688670
Start: 891477
End: 892073
Strand: Direct
Name: 218688670
Synonym: ECED1_0855
Alternate gene names: NA
Gene position: 891477-892073 (Clockwise)
Preceding gene: 218688669
Following gene: 218688677
Centisome position: 17.11
GC content: 48.41
Gene sequence:
>597_bases GTGGCGGTGTCTTTGGTGAGAAATCGGAATAAGGAGCTGCCAATGGATCACTACCTTGAGATCCGCGTTCTGCCAGATCC TGAATTTTCGAGCGAAATGTTGATGGCGGCGTTATTTGCAAAACTGCATCGGGTATTAGGTGCAAGAGGGCAAGGCGATA TCGGCGTGAGTTTCCCGGACGTAAATGTTATGCCTGGAACGCATTTACGCTTGCATGGTAGCGCCCAGGCATTGCAAGAA CTTGAAGCCTCGACGTGGCGTAAAGGGCTGACAGATTACTGCCAATGTTCGCCTGTCACGCCAGTTCCTGAAATTAAAGG CTGGCGAGTCGTAAGTCGTGTACAGGTAAAAAGTAACCCTCAGCGTCTGTTAAGGCGTTCAGTGAAAAAAGGCTGGCTAA CTGAAGAACAGGCGATTGAACGACTGGCGACGCAGGCTGAACAGCGGACCGATTTACCCTTTCTTAATATGAAGAGTTTG TCGAGTCAGCAACAGTTCAAGTTGTTTATCCGTCATGGTGATTTGCTCAAAGAACCGGTTAAAGGGGAATTTAGTAGTTA TGGATTAAGCGCAACCGCCACTATTCCCTGGTTTTGA
Upstream 100 bases:
>100_bases AAAGAAAAACTCGACTTTTATACCTTACTGGACAATTGGGTGACTAAAGGGATGAAACCAGACGTTAAGCAGCAGCACTA CGTGATGGCTGTGCTGATCC
Downstream 100 bases:
>100_bases TGCTTTGCAATTTTTAACAGGCCTGGCCATGTGATTGGGCCTTTTTATGCGCGCCATGCCCACCGCATACAAAAAAAGCC CGTACTTTCGTACGAGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Protein Csy4 Family; Csy4 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Protein
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAVSLVRNRNKELPMDHYLEIRVLPDPEFSSEMLMAALFAKLHRVLGARGQGDIGVSFPDVNVMPGTHLRLHGSAQALQE LEASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNPQRLLRRSVKKGWLTEEQAIERLATQAEQRTDLPFLNMKSL SSQQQFKLFIRHGDLLKEPVKGEFSSYGLSATATIPWF
Sequences:
>Translated_198_residues MAVSLVRNRNKELPMDHYLEIRVLPDPEFSSEMLMAALFAKLHRVLGARGQGDIGVSFPDVNVMPGTHLRLHGSAQALQE LEASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNPQRLLRRSVKKGWLTEEQAIERLATQAEQRTDLPFLNMKSL SSQQQFKLFIRHGDLLKEPVKGEFSSYGLSATATIPWF >Mature_197_residues AVSLVRNRNKELPMDHYLEIRVLPDPEFSSEMLMAALFAKLHRVLGARGQGDIGVSFPDVNVMPGTHLRLHGSAQALQEL EASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNPQRLLRRSVKKGWLTEEQAIERLATQAEQRTDLPFLNMKSLS SQQQFKLFIRHGDLLKEPVKGEFSSYGLSATATIPWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22413; Mature: 22282
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSLVRNRNKELPMDHYLEIRVLPDPEFSSEMLMAALFAKLHRVLGARGQGDIGVSFPD CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VNVMPGTHLRLHGSAQALQELEASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNP CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHEECCCCH QRLLRRSVKKGWLTEEQAIERLATQAEQRTDLPFLNMKSLSSQQQFKLFIRHGDLLKEPV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCHHHHCCC KGEFSSYGLSATATIPWF CCCHHHCCCCEEEECCCC >Mature Secondary Structure AVSLVRNRNKELPMDHYLEIRVLPDPEFSSEMLMAALFAKLHRVLGARGQGDIGVSFPD CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VNVMPGTHLRLHGSAQALQELEASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNP CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHEECCCCH QRLLRRSVKKGWLTEEQAIERLATQAEQRTDLPFLNMKSLSSQQQFKLFIRHGDLLKEPV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCHHHHCCC KGEFSSYGLSATATIPWF CCCHHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA