Click here to switch to the map view.

The map label for this gene is ybjC [H]

Identifier: 218688633

GI number: 218688633

Start: 847923

End: 848210

Strand: Direct

Name: ybjC [H]

Synonym: ECED1_0814

Alternate gene names: 218688633

Gene position: 847923-848210 (Clockwise)

Preceding gene: 218688631

Following gene: 218688634

Centisome position: 16.28

GC content: 48.96

Gene sequence:

>288_bases
ATGCGCGCGATCGGTAAATTGCCTAAAAGCGTGTTGATACTGGAATTTATCGGAATGATGTTGCTGGCGGTGGCGCTGCT
GTCGGTAAGCGACTCCCTGTCGCTACCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTT
TGCTCATGATTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGAACCATCCACCG
CAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGA

Upstream 100 bases:

>100_bases
GTAGGTTTAACCTGTTGCATTAATTGCTAAAAGCTATAACTGTTAAACACAATGCAGTGAAAAGTTTTAGACTGAAGGCT
CACTTTGCAGAGGGAAGCGT

Downstream 100 bases:

>100_bases
ACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACA
GCGCCCGTGCGACGTCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMIPAAVVVILQVAKRLAPQLMNHPP
QYSRSEREKDNDANH

Sequences:

>Translated_95_residues
MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMIPAAVVVILQVAKRLAPQLMNHPP
QYSRSEREKDNDANH
>Mature_95_residues
MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMIPAAVVVILQVAKRLAPQLMNHPP
QYSRSEREKDNDANH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787074, Length=95, Percent_Identity=96.8421052631579, Blast_Score=161, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010815 [H]

Pfam domain/function: PF07214 DUF1418 [H]

EC number: NA

Molecular weight: Translated: 10532; Mature: 10532

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMIPAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VVVILQVAKRLAPQLMNHPPQYSRSEREKDNDANH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMIPAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VVVILQVAKRLAPQLMNHPPQYSRSEREKDNDANH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3530878; 7567469 [H]