| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is frmB [H]
Identifier: 218688226
GI number: 218688226
Start: 404265
End: 405098
Strand: Reverse
Name: frmB [H]
Synonym: ECED1_0383
Alternate gene names: 218688226
Gene position: 405098-404265 (Counterclockwise)
Preceding gene: 218688227
Following gene: 218688217
Centisome position: 7.78
GC content: 48.56
Gene sequence:
>834_bases ATGGAACTCATTGAAAAACATGCCAGCTTTGGCGGCTGGCAAAATGTGTATCGGCATTATTCCCCATCACTGAAATGTGA AATGAATGTCGGCGTCTATCTCCCACCAAAAGCCGAGAATGAAAAATTGCCGGTGTTGTACTGGCTTTCAGGCCTGACCT GCAACGAGCAGAATTTCATTACTAAATCGGGGATGCAGCGTTACGCGGCTGAGCACAACATTATTGTTGTTGCGCCGGAC ACCAGTCCGCGAGGCAGTCATGTCGCAGATGCTGACCGTTACGATCTCGGGCAAGGTGCCGGGTTTTACCTGAACGCGAC GCAAGCGCCGTGGAATGAACATTACAAAATGTATGACTATATCCGCAACGAGCTGCCGAATTTAGTGATGCATCATTTTC CAGCAACGGCCAGAAAGTCTATCTCAGGTCATTCTATGGGCGGGCTGGGCGCGCTGGTGCTGGCGTTACGTAACCCAGAT GAATATGCCAGCGTCTCGGCGTTTTCGCCCATTGTCTCCCCATCGCAAGTACCGTGGGGACAGCAAGCCTTTGCCGCATA TCTTGGTGAAAATAAAGATGCCTGGTTGGATTACGACCCGGTGAGTCTTATTTCACAAGGTCAACGCGTTGCGGAAATCA TGGTTGATCAGGGATTGAGTGATGATTTTTACGCAGAACAGCTGCGGACTCCAAATCTTGAAAAGATCTGCCAGGAGATG AATATCAAGACGTTAATCCGTTATCACGAGGGTTATGATCACAGCTATTATTTTGTCTCCAGTTTTATTGGCGAGCATAT TGCGTACCACGCCAATAAACTGAATATGCGTTGA
Upstream 100 bases:
>100_bases GTTACTGATTTCCCGCTGGTTTACCCCGTCCAGTTCAGACGGGGTTCTTAATACTCTCCCCGGGCAGCCGTCCGGGGGAT TAACCGTGAGATAATGACTG
Downstream 100 bases:
>100_bases TAATAGTGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCCACATTTCGCTCGTAAACCGTAGGCCTGATAAGA CGCGAAAAGCGTCGCATCAG
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAENEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPD TSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPATARKSISGHSMGGLGALVLALRNPD EYASVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR
Sequences:
>Translated_277_residues MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAENEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPD TSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPATARKSISGHSMGGLGALVLALRNPD EYASVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR >Mature_277_residues MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAENEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPD TSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPATARKSISGHSMGGLGALVLALRNPD EYASVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=280, Percent_Identity=50, Blast_Score=291, Evalue=5e-79, Organism=Escherichia coli, GI1786551, Length=277, Percent_Identity=97.1119133574007, Blast_Score=568, Evalue=1e-163, Organism=Escherichia coli, GI1788477, Length=276, Percent_Identity=54.3478260869565, Blast_Score=314, Evalue=4e-87, Organism=Caenorhabditis elegans, GI17510185, Length=280, Percent_Identity=46.4285714285714, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6322393, Length=298, Percent_Identity=41.2751677852349, Blast_Score=216, Evalue=4e-57, Organism=Drosophila melanogaster, GI45551932, Length=281, Percent_Identity=50.1779359430605, Blast_Score=285, Evalue=2e-77, Organism=Drosophila melanogaster, GI24648347, Length=281, Percent_Identity=50.1779359430605, Blast_Score=285, Evalue=3e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31377; Mature: 31377
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAENEKLPVLYWLSGLTCNEQNFI CCHHHHHHCCCCHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCEECCCCCH TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH IRNELPNLVMHHFPATARKSISGHSMGGLGALVLALRNPDEYASVSAFSPIVSPSQVPWG HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCC QQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM HHHHHHHHCCCCCCEECCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHC NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAENEKLPVLYWLSGLTCNEQNFI CCHHHHHHCCCCHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCEECCCCCH TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH IRNELPNLVMHHFPATARKSISGHSMGGLGALVLALRNPDEYASVSAFSPIVSPSQVPWG HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCC QQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM HHHHHHHHCCCCCCEECCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHC NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA