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The map label for this gene is yadN [H]

Identifier: 218688018

GI number: 218688018

Start: 162300

End: 162914

Strand: Reverse

Name: yadN [H]

Synonym: ECED1_0146

Alternate gene names: 218688018

Gene position: 162914-162300 (Counterclockwise)

Preceding gene: 218688019

Following gene: 218688017

Centisome position: 3.13

GC content: 42.6

Gene sequence:

>615_bases
ATGGAATATTACTCAAGGATTTTTATGTCTAAAAAATTAGGTTTTGCGCTGTCCGGTATTATGTTGGCAATGGCTGCTGG
TACTGCATTTGCTGCTAACGATATGGACGGCGGTCAATTAAATATTAGCGGTCTGGTCGTTGATAACACTTGTGAAGCTC
GTGTTGATGGCGGTAACAAAGACGGTCTGATCCTGCTGCAAACCGCTACTGTTGCTGAAATTACTGATGGTGTACTGGAT
ACCACTGTAGGTGCTAAAGCTAAACCATTCAGCATTACTATTGACTGCAGCAAAGCTAACCCGGCTCCGGGTACTACTGC
AAAAATGACCTTCGGTTCTGTTTTCTTTGGTAACAGCAAAGGAACACTGAACAACGACATGTCTATTAACACCCCGTCTG
ACGGCGTAAATATCGCTCTGCACAATATTGAAGGTTCTACTATTAAACAGGTTCAGGTCAATAATCCGGGTGATGTTTAC
AGCAAAACTCTGGATTCAACGTCTAAATCTGCAACCTACGATTTTAAAGCATCCTATGTTCGTGCGGATGCAAGCAAAGC
AGCTACTGCCGGTTATGTAAAAACCAACTCAGCATATACCATTACTTACCAGTAA

Upstream 100 bases:

>100_bases
ATACTTAGTAAAAAACAAACAAACATCATTAACAAAGTAACGTTCAGTTACATGGCATTGCATCAAAATCTCATCATCAT
GCAATGCTGTTATCTGCTTT

Downstream 100 bases:

>100_bases
ATATCAACCGCTTAAATTGATCGGGTGAATATATACAGGGAATAACATCAAATATTTTTACTTTTGATAATTATTCCCTG
TTTTAATTAATTCTGTAAGG

Product: putative fimbrial-like adhesin exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MEYYSRIFMSKKLGFALSGIMLAMAAGTAFAANDMDGGQLNISGLVVDNTCEARVDGGNKDGLILLQTATVAEITDGVLD
TTVGAKAKPFSITIDCSKANPAPGTTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIEGSTIKQVQVNNPGDVY
SKTLDSTSKSATYDFKASYVRADASKAATAGYVKTNSAYTITYQ

Sequences:

>Translated_204_residues
MEYYSRIFMSKKLGFALSGIMLAMAAGTAFAANDMDGGQLNISGLVVDNTCEARVDGGNKDGLILLQTATVAEITDGVLD
TTVGAKAKPFSITIDCSKANPAPGTTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIEGSTIKQVQVNNPGDVY
SKTLDSTSKSATYDFKASYVRADASKAATAGYVKTNSAYTITYQ
>Mature_204_residues
MEYYSRIFMSKKLGFALSGIMLAMAAGTAFAANDMDGGQLNISGLVVDNTCEARVDGGNKDGLILLQTATVAEITDGVLD
TTVGAKAKPFSITIDCSKANPAPGTTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIEGSTIKQVQVNNPGDVY
SKTLDSTSKSATYDFKASYVRADASKAATAGYVKTNSAYTITYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786334, Length=196, Percent_Identity=86.2244897959184, Blast_Score=340, Evalue=4e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 21362; Mature: 21362

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYYSRIFMSKKLGFALSGIMLAMAAGTAFAANDMDGGQLNISGLVVDNTCEARVDGGNK
CCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEECCCEEEECCCCC
DGLILLQTATVAEITDGVLDTTVGAKAKPFSITIDCSKANPAPGTTAKMTFGSVFFGNSK
CCEEEEEECCHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCC
GTLNNDMSINTPSDGVNIALHNIEGSTIKQVQVNNPGDVYSKTLDSTSKSATYDFKASYV
CCCCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEEE
RADASKAATAGYVKTNSAYTITYQ
ECCCCCCCCCCEEECCCEEEEEEC
>Mature Secondary Structure
MEYYSRIFMSKKLGFALSGIMLAMAAGTAFAANDMDGGQLNISGLVVDNTCEARVDGGNK
CCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEECCCEEEECCCCC
DGLILLQTATVAEITDGVLDTTVGAKAKPFSITIDCSKANPAPGTTAKMTFGSVFFGNSK
CCEEEEEECCHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCC
GTLNNDMSINTPSDGVNIALHNIEGSTIKQVQVNNPGDVYSKTLDSTSKSATYDFKASYV
CCCCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEEE
RADASKAATAGYVKTNSAYTITYQ
ECCCCCCCCCCEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]